Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
COL1A1P02452 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
COL1A1P02452 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL1A1P02452 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.26■■□□□ 1.95
COL1A1P02452 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL1A1P02452 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.26■■□□□ 1.95
COL1A1P02452 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL1A1P02452 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.25■■□□□ 1.95
COL1A1P02452 BX842568.3-201ENST00000418104 571 ntBASIC27.25■■□□□ 1.95
COL1A1P02452 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A1P02452 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC27.25■■□□□ 1.95
COL1A1P02452 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A1P02452 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A1P02452 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A1P02452 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
COL1A1P02452 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.25■■□□□ 1.95
COL1A1P02452 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A1P02452 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
COL1A1P02452 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
COL1A1P02452 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A1P02452 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC27.25■■□□□ 1.95
COL1A1P02452 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL1A1P02452 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.24■■□□□ 1.95
COL1A1P02452 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27.24■■□□□ 1.95
COL1A1P02452 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL1A1P02452 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.24■■□□□ 1.95
COL1A1P02452 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC27.24■■□□□ 1.95
COL1A1P02452 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.24■■□□□ 1.95
COL1A1P02452 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
COL1A1P02452 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL1A1P02452 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A1P02452 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A1P02452 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.23■■□□□ 1.95
COL1A1P02452 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A1P02452 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A1P02452 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.23■■□□□ 1.95
COL1A1P02452 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A1P02452 AC233992.3-201ENST00000607491 485 ntBASIC27.23■■□□□ 1.95
COL1A1P02452 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
COL1A1P02452 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.22■■□□□ 1.95
COL1A1P02452 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
COL1A1P02452 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.22■■□□□ 1.95
COL1A1P02452 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.22■■□□□ 1.95
COL1A1P02452 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL1A1P02452 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.22■■□□□ 1.95
COL1A1P02452 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL1A1P02452 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL1A1P02452 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL1A1P02452 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
COL1A1P02452 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.21■■□□□ 1.95
COL1A1P02452 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.21■■□□□ 1.95
COL1A1P02452 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
COL1A1P02452 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.21■■□□□ 1.95
COL1A1P02452 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.21■■□□□ 1.95
COL1A1P02452 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A1P02452 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.2■■□□□ 1.95
COL1A1P02452 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
COL1A1P02452 AL499627.2-201ENST00000606283 725 ntBASIC27.2■■□□□ 1.95
COL1A1P02452 SP2-202ENST00000613139 908 ntTSL 5 BASIC27.2■■□□□ 1.95
COL1A1P02452 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL1A1P02452 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.2■■□□□ 1.94
COL1A1P02452 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL1A1P02452 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.2■■□□□ 1.94
COL1A1P02452 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.19■■□□□ 1.94
COL1A1P02452 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
COL1A1P02452 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.19■■□□□ 1.94
COL1A1P02452 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.19■■□□□ 1.94
COL1A1P02452 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.19■■□□□ 1.94
COL1A1P02452 AC034268.1-201ENST00000441047 882 ntBASIC27.19■■□□□ 1.94
COL1A1P02452 AC010525.1-201ENST00000585559 441 ntBASIC27.19■■□□□ 1.94
COL1A1P02452 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
COL1A1P02452 AC133637.1-201ENST00000624115 1537 ntBASIC27.18■■□□□ 1.94
COL1A1P02452 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL1A1P02452 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL1A1P02452 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL1A1P02452 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
COL1A1P02452 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.18■■□□□ 1.94
COL1A1P02452 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC27.18■■□□□ 1.94
COL1A1P02452 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.18■■□□□ 1.94
COL1A1P02452 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.18■■□□□ 1.94
COL1A1P02452 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL1A1P02452 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL1A1P02452 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.17■■□□□ 1.94
COL1A1P02452 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL1A1P02452 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL1A1P02452 AC144652.1-201ENST00000609974 1624 ntBASIC27.17■■□□□ 1.94
COL1A1P02452 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL1A1P02452 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL1A1P02452 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27.17■■□□□ 1.94
COL1A1P02452 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL1A1P02452 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.16■■□□□ 1.94
COL1A1P02452 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms