Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC093536.1-201ENST00000569153 554 ntBASIC19.4■□□□□ 0.7
HLA-DQB1P01920 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DQB1P01920 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB1P01920 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 MIR639-201ENST00000384974 98 ntBASIC19.38■□□□□ 0.69
HLA-DQB1P01920 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.38■□□□□ 0.69
HLA-DQB1P01920 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQB1P01920 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 MIR7108-201ENST00000614319 87 ntBASIC19.36■□□□□ 0.69
HLA-DQB1P01920 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB1P01920 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 AC090877.2-201ENST00000558441 1738 ntBASIC19.35■□□□□ 0.69
HLA-DQB1P01920 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 AC022413.1-201ENST00000624602 984 ntBASIC19.35■□□□□ 0.69
HLA-DQB1P01920 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB1P01920 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB1P01920 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQB1P01920 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
HLA-DQB1P01920 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HLA-DQB1P01920 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQB1P01920 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQB1P01920 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQB1P01920 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQB1P01920 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQB1P01920 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQB1P01920 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DQB1P01920 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DQB1P01920 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQB1P01920 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DQB1P01920 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
HLA-DQB1P01920 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms