Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRACP01848 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRACP01848 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRACP01848 FBXW4P1-201ENST00000426721 2239 ntBASIC14.6□□□□□ -0.07
TRACP01848 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.6□□□□□ -0.07
TRACP01848 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRACP01848 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.59□□□□□ -0.07
TRACP01848 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRACP01848 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
TRACP01848 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.59□□□□□ -0.07
TRACP01848 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.59□□□□□ -0.07
TRACP01848 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRACP01848 AC108673.1-201ENST00000510422 1159 ntBASIC14.59□□□□□ -0.07
TRACP01848 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC14.59□□□□□ -0.07
TRACP01848 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.59□□□□□ -0.07
TRACP01848 CALM3-209ENST00000597743 577 ntTSL 4 BASIC14.59□□□□□ -0.07
TRACP01848 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRACP01848 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRACP01848 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRACP01848 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.59□□□□□ -0.07
TRACP01848 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRACP01848 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRACP01848 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRACP01848 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRACP01848 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRACP01848 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
TRACP01848 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.58□□□□□ -0.07
TRACP01848 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRACP01848 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRACP01848 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRACP01848 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
TRACP01848 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.58□□□□□ -0.08
TRACP01848 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRACP01848 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRACP01848 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRACP01848 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.58□□□□□ -0.08
TRACP01848 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRACP01848 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.58□□□□□ -0.08
TRACP01848 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRACP01848 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC14.57□□□□□ -0.08
TRACP01848 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRACP01848 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRACP01848 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRACP01848 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRACP01848 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.56□□□□□ -0.08
TRACP01848 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC14.56□□□□□ -0.08
TRACP01848 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRACP01848 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.56□□□□□ -0.08
TRACP01848 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRACP01848 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRACP01848 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRACP01848 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRACP01848 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRACP01848 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRACP01848 RPS2-210ENST00000530225 765 ntTSL 2 BASIC14.55□□□□□ -0.08
TRACP01848 AC026310.3-201ENST00000625186 2373 ntBASIC14.55□□□□□ -0.08
TRACP01848 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRACP01848 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRACP01848 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRACP01848 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRACP01848 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRACP01848 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.54□□□□□ -0.08
TRACP01848 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRACP01848 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.54□□□□□ -0.08
TRACP01848 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.54□□□□□ -0.08
TRACP01848 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms