Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.87■■□□□ 1.25
PDGFBP01127 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 AC010501.1-201ENST00000606270 1962 ntBASIC22.87■■□□□ 1.25
PDGFBP01127 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.87■■□□□ 1.25
PDGFBP01127 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PDGFBP01127 GPX1P1-201ENST00000388829 606 ntBASIC22.87■■□□□ 1.25
PDGFBP01127 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PDGFBP01127 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.87■■□□□ 1.25
PDGFBP01127 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.87■■□□□ 1.25
PDGFBP01127 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.87■■□□□ 1.25
PDGFBP01127 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
PDGFBP01127 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PDGFBP01127 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFBP01127 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFBP01127 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.86■■□□□ 1.25
PDGFBP01127 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.86■■□□□ 1.25
PDGFBP01127 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFBP01127 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
PDGFBP01127 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFBP01127 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
PDGFBP01127 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.85■■□□□ 1.25
PDGFBP01127 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDGFBP01127 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.85■■□□□ 1.25
PDGFBP01127 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDGFBP01127 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDGFBP01127 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFBP01127 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFBP01127 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFBP01127 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFBP01127 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.84■■□□□ 1.25
PDGFBP01127 MIR4651-201ENST00000582622 73 ntBASIC22.84■■□□□ 1.25
PDGFBP01127 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PDGFBP01127 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PDGFBP01127 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PDGFBP01127 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFBP01127 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFBP01127 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFBP01127 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.84■■□□□ 1.25
PDGFBP01127 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDGFBP01127 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDGFBP01127 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDGFBP01127 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PDGFBP01127 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.83■■□□□ 1.25
PDGFBP01127 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PDGFBP01127 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.83■■□□□ 1.25
PDGFBP01127 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.83■■□□□ 1.25
PDGFBP01127 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.83■■□□□ 1.25
PDGFBP01127 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
PDGFBP01127 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.83■■□□□ 1.25
PDGFBP01127 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDGFBP01127 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDGFBP01127 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PDGFBP01127 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDGFBP01127 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDGFBP01127 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDGFBP01127 AC011767.1-201ENST00000617410 1153 ntBASIC22.82■■□□□ 1.24
PDGFBP01127 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.82■■□□□ 1.24
PDGFBP01127 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.82■■□□□ 1.24
PDGFBP01127 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDGFBP01127 SLC6A10P-202ENST00000431994 2058 ntBASIC22.81■■□□□ 1.24
PDGFBP01127 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
PDGFBP01127 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFBP01127 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFBP01127 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.81■■□□□ 1.24
PDGFBP01127 OR2I1P-207ENST00000453522 948 ntBASIC22.81■■□□□ 1.24
PDGFBP01127 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.81■■□□□ 1.24
PDGFBP01127 AC093827.2-201ENST00000512654 315 ntBASIC22.81■■□□□ 1.24
PDGFBP01127 KRT18P6-201ENST00000555540 1265 ntBASIC22.81■■□□□ 1.24
PDGFBP01127 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.81■■□□□ 1.24
PDGFBP01127 AC142086.2-201ENST00000569753 217 ntBASIC22.81■■□□□ 1.24
PDGFBP01127 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.81■■□□□ 1.24
PDGFBP01127 TPRG1LP1-201ENST00000598702 760 ntBASIC22.81■■□□□ 1.24
PDGFBP01127 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFBP01127 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFBP01127 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFBP01127 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFBP01127 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFBP01127 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.81■■□□□ 1.24
PDGFBP01127 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFBP01127 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFBP01127 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
PDGFBP01127 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFBP01127 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PDGFBP01127 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
PDGFBP01127 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFBP01127 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFBP01127 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.8■■□□□ 1.24
PDGFBP01127 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
PDGFBP01127 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.8■■□□□ 1.24
PDGFBP01127 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFBP01127 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFBP01127 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFBP01127 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms