Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-2O95096 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-2O95096 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-2O95096 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.74■□□□□ 0.91
NKX2-2O95096 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.74■□□□□ 0.91
NKX2-2O95096 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-2O95096 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-2O95096 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-2O95096 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-2O95096 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-2O95096 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.73■□□□□ 0.91
NKX2-2O95096 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.73■□□□□ 0.91
NKX2-2O95096 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NKX2-2O95096 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-2O95096 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.73■□□□□ 0.91
NKX2-2O95096 C17orf82-201ENST00000623772 1530 ntBASIC20.73■□□□□ 0.91
NKX2-2O95096 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-2O95096 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-2O95096 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-2O95096 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NKX2-2O95096 AL356441.2-201ENST00000443009 864 ntBASIC20.72■□□□□ 0.91
NKX2-2O95096 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.72■□□□□ 0.91
NKX2-2O95096 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.72■□□□□ 0.91
NKX2-2O95096 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.72■□□□□ 0.91
NKX2-2O95096 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.72■□□□□ 0.91
NKX2-2O95096 AL117332.1-201ENST00000622628 974 ntBASIC20.72■□□□□ 0.91
NKX2-2O95096 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.72■□□□□ 0.91
NKX2-2O95096 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-2O95096 LINC01529-204ENST00000636474 1715 ntBASIC20.72■□□□□ 0.91
NKX2-2O95096 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX2-2O95096 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NKX2-2O95096 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.71■□□□□ 0.91
NKX2-2O95096 C9orf163-202ENST00000624034 2573 ntBASIC20.71■□□□□ 0.91
NKX2-2O95096 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NKX2-2O95096 MIR3621-201ENST00000580529 85 ntBASIC20.71■□□□□ 0.91
NKX2-2O95096 AL356740.2-201ENST00000601559 647 ntBASIC20.71■□□□□ 0.91
NKX2-2O95096 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NKX2-2O95096 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.71■□□□□ 0.91
NKX2-2O95096 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-2O95096 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
NKX2-2O95096 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.7■□□□□ 0.9
NKX2-2O95096 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
NKX2-2O95096 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.7■□□□□ 0.9
NKX2-2O95096 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-2O95096 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-2O95096 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-2O95096 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
NKX2-2O95096 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-2O95096 DUX4L4-201ENST00000566884 1269 ntBASIC20.7■□□□□ 0.9
NKX2-2O95096 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-2O95096 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-2O95096 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.7■□□□□ 0.9
NKX2-2O95096 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-2O95096 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
NKX2-2O95096 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NKX2-2O95096 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-2O95096 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-2O95096 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-2O95096 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-2O95096 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.69■□□□□ 0.9
NKX2-2O95096 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NKX2-2O95096 AC012676.1-201ENST00000574705 1949 ntBASIC20.68■□□□□ 0.9
NKX2-2O95096 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.68■□□□□ 0.9
NKX2-2O95096 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NKX2-2O95096 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-2O95096 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.68■□□□□ 0.9
NKX2-2O95096 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-2O95096 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-2O95096 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.68■□□□□ 0.9
NKX2-2O95096 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-2O95096 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NKX2-2O95096 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX2-2O95096 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.67■□□□□ 0.9
NKX2-2O95096 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-2O95096 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX2-2O95096 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NKX2-2O95096 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-2O95096 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX2-2O95096 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-2O95096 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX2-2O95096 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-2O95096 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-2O95096 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-2O95096 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NKX2-2O95096 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.66■□□□□ 0.9
NKX2-2O95096 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NKX2-2O95096 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-2O95096 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-2O95096 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NKX2-2O95096 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-2O95096 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NKX2-2O95096 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
NKX2-2O95096 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-2O95096 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-2O95096 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-2O95096 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NKX2-2O95096 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-2O95096 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-2O95096 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-2O95096 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms