Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
BEST1O76090 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.65■■□□□ 1.38
BEST1O76090 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.65■■□□□ 1.38
BEST1O76090 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.65■■□□□ 1.38
BEST1O76090 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.65■■□□□ 1.38
BEST1O76090 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BEST1O76090 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
BEST1O76090 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.65■■□□□ 1.38
BEST1O76090 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.65■■□□□ 1.38
BEST1O76090 DUX4L19-201ENST00000557448 1267 ntBASIC23.65■■□□□ 1.38
BEST1O76090 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
BEST1O76090 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BEST1O76090 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
BEST1O76090 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
BEST1O76090 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
BEST1O76090 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
BEST1O76090 MIR3181-201ENST00000578512 73 ntBASIC23.64■■□□□ 1.37
BEST1O76090 AC092171.4-201ENST00000609130 632 ntBASIC23.64■■□□□ 1.37
BEST1O76090 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.64■■□□□ 1.37
BEST1O76090 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
BEST1O76090 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
BEST1O76090 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BEST1O76090 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.64■■□□□ 1.37
BEST1O76090 AC135279.3-201ENST00000610945 1311 ntBASIC23.63■■□□□ 1.37
BEST1O76090 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BEST1O76090 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
BEST1O76090 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.63■■□□□ 1.37
BEST1O76090 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.63■■□□□ 1.37
BEST1O76090 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.63■■□□□ 1.37
BEST1O76090 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
BEST1O76090 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BEST1O76090 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
BEST1O76090 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BEST1O76090 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
BEST1O76090 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.62■■□□□ 1.37
BEST1O76090 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.62■■□□□ 1.37
BEST1O76090 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
BEST1O76090 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.62■■□□□ 1.37
BEST1O76090 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BEST1O76090 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
BEST1O76090 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BEST1O76090 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.61■■□□□ 1.37
BEST1O76090 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.61■■□□□ 1.37
BEST1O76090 pRNA.6-201ENST00000610482 90 ntBASIC23.61■■□□□ 1.37
BEST1O76090 pRNA.5-201ENST00000612139 90 ntBASIC23.61■■□□□ 1.37
BEST1O76090 pRNA.11-201ENST00000618423 90 ntBASIC23.61■■□□□ 1.37
BEST1O76090 pRNA.13-201ENST00000619112 90 ntBASIC23.61■■□□□ 1.37
BEST1O76090 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BEST1O76090 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.61■■□□□ 1.37
BEST1O76090 FP325331.1-202ENST00000623531 1380 ntBASIC23.61■■□□□ 1.37
BEST1O76090 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
BEST1O76090 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BEST1O76090 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BEST1O76090 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
BEST1O76090 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.6■■□□□ 1.37
BEST1O76090 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.6■■□□□ 1.37
BEST1O76090 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BEST1O76090 ANOS2P-203ENST00000472227 1816 ntBASIC23.6■■□□□ 1.37
BEST1O76090 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BEST1O76090 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
BEST1O76090 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BEST1O76090 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
BEST1O76090 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
BEST1O76090 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BEST1O76090 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BEST1O76090 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BEST1O76090 LINC01529-204ENST00000636474 1715 ntBASIC23.59■■□□□ 1.37
BEST1O76090 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
BEST1O76090 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.59■■□□□ 1.37
BEST1O76090 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.59■■□□□ 1.37
BEST1O76090 DUX4L4-201ENST00000566884 1269 ntBASIC23.59■■□□□ 1.37
BEST1O76090 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BEST1O76090 AL031432.3-201ENST00000607698 485 ntBASIC23.59■■□□□ 1.37
BEST1O76090 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.59■■□□□ 1.37
BEST1O76090 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
BEST1O76090 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BEST1O76090 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.59■■□□□ 1.37
BEST1O76090 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
BEST1O76090 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
BEST1O76090 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BEST1O76090 MIR4767-201ENST00000582827 78 ntBASIC23.58■■□□□ 1.37
BEST1O76090 AC005837.3-201ENST00000612163 286 ntBASIC23.58■■□□□ 1.37
BEST1O76090 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.58■■□□□ 1.37
BEST1O76090 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BEST1O76090 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.36
BEST1O76090 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.58■■□□□ 1.36
BEST1O76090 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BEST1O76090 AL353803.4-201ENST00000565882 1934 ntBASIC23.57■■□□□ 1.36
BEST1O76090 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BEST1O76090 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.57■■□□□ 1.36
BEST1O76090 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.57■■□□□ 1.36
BEST1O76090 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.57■■□□□ 1.36
BEST1O76090 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BEST1O76090 AC133561.4-201ENST00000566112 224 ntBASIC23.57■■□□□ 1.36
BEST1O76090 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BEST1O76090 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BEST1O76090 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
BEST1O76090 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
BEST1O76090 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.56■■□□□ 1.36
BEST1O76090 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms