Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN2BO60939 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.23■□□□□ 0.99
SCN2BO60939 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN2BO60939 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.23■□□□□ 0.99
SCN2BO60939 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN2BO60939 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN2BO60939 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN2BO60939 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.23■□□□□ 0.99
SCN2BO60939 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN2BO60939 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN2BO60939 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SCN2BO60939 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.23■□□□□ 0.99
SCN2BO60939 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN2BO60939 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN2BO60939 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.22■□□□□ 0.99
SCN2BO60939 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCN2BO60939 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SCN2BO60939 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.22■□□□□ 0.99
SCN2BO60939 AC137630.3-201ENST00000607245 391 ntBASIC21.22■□□□□ 0.99
SCN2BO60939 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN2BO60939 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCN2BO60939 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.22■□□□□ 0.99
SCN2BO60939 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN2BO60939 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN2BO60939 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN2BO60939 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN2BO60939 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN2BO60939 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN2BO60939 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN2BO60939 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN2BO60939 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN2BO60939 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.21■□□□□ 0.99
SCN2BO60939 GUSBP5-202ENST00000510805 1989 ntBASIC21.21■□□□□ 0.99
SCN2BO60939 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN2BO60939 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN2BO60939 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN2BO60939 AL353803.4-201ENST00000565882 1934 ntBASIC21.2■□□□□ 0.98
SCN2BO60939 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN2BO60939 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.2■□□□□ 0.98
SCN2BO60939 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN2BO60939 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.2■□□□□ 0.98
SCN2BO60939 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN2BO60939 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN2BO60939 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SCN2BO60939 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN2BO60939 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SCN2BO60939 KRT8P33-201ENST00000508125 1423 ntBASIC21.2■□□□□ 0.98
SCN2BO60939 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN2BO60939 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN2BO60939 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN2BO60939 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN2BO60939 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN2BO60939 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.19■□□□□ 0.98
SCN2BO60939 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN2BO60939 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
SCN2BO60939 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN2BO60939 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.19■□□□□ 0.98
SCN2BO60939 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN2BO60939 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SCN2BO60939 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SCN2BO60939 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN2BO60939 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN2BO60939 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN2BO60939 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN2BO60939 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN2BO60939 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN2BO60939 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SCN2BO60939 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN2BO60939 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN2BO60939 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN2BO60939 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN2BO60939 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SCN2BO60939 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SCN2BO60939 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SCN2BO60939 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN2BO60939 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN2BO60939 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN2BO60939 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SCN2BO60939 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN2BO60939 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN2BO60939 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN2BO60939 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN2BO60939 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN2BO60939 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN2BO60939 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN2BO60939 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.16■□□□□ 0.98
SCN2BO60939 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN2BO60939 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN2BO60939 ECEL1P1-201ENST00000373592 1742 ntBASIC21.16■□□□□ 0.98
SCN2BO60939 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SCN2BO60939 YBX1P4-201ENST00000392794 808 ntBASIC21.16■□□□□ 0.98
SCN2BO60939 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN2BO60939 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.16■□□□□ 0.98
SCN2BO60939 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN2BO60939 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SCN2BO60939 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN2BO60939 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN2BO60939 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN2BO60939 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SCN2BO60939 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms