Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.04■□□□□ 0.96
PLOD3O60568 MIR6724-1-201ENST00000616420 92 ntBASIC21.04■□□□□ 0.96
PLOD3O60568 MIR6724-2-201ENST00000616483 92 ntBASIC21.04■□□□□ 0.96
PLOD3O60568 MIR6724-4-201ENST00000617390 92 ntBASIC21.04■□□□□ 0.96
PLOD3O60568 MIR6724-3-201ENST00000622482 92 ntBASIC21.04■□□□□ 0.96
PLOD3O60568 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.04■□□□□ 0.96
PLOD3O60568 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PLOD3O60568 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PLOD3O60568 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PLOD3O60568 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PLOD3O60568 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PLOD3O60568 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.03■□□□□ 0.96
PLOD3O60568 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PLOD3O60568 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PLOD3O60568 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PLOD3O60568 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PLOD3O60568 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PLOD3O60568 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PLOD3O60568 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.03■□□□□ 0.96
PLOD3O60568 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.03■□□□□ 0.96
PLOD3O60568 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PLOD3O60568 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.02■□□□□ 0.96
PLOD3O60568 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PLOD3O60568 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.02■□□□□ 0.96
PLOD3O60568 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PLOD3O60568 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
PLOD3O60568 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.02■□□□□ 0.96
PLOD3O60568 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PLOD3O60568 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.02■□□□□ 0.96
PLOD3O60568 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PLOD3O60568 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.02■□□□□ 0.95
PLOD3O60568 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
PLOD3O60568 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PLOD3O60568 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.01■□□□□ 0.95
PLOD3O60568 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.01■□□□□ 0.95
PLOD3O60568 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 KRT16P3-201ENST00000439127 1283 ntBASIC21.01■□□□□ 0.95
PLOD3O60568 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PLOD3O60568 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PLOD3O60568 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PLOD3O60568 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PLOD3O60568 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PLOD3O60568 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21■□□□□ 0.95
PLOD3O60568 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PLOD3O60568 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PLOD3O60568 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21■□□□□ 0.95
PLOD3O60568 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.99■□□□□ 0.95
PLOD3O60568 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PLOD3O60568 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PLOD3O60568 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PLOD3O60568 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PLOD3O60568 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PLOD3O60568 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.99■□□□□ 0.95
PLOD3O60568 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.99■□□□□ 0.95
PLOD3O60568 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PLOD3O60568 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.99■□□□□ 0.95
PLOD3O60568 DUSP8P3-201ENST00000399571 1760 ntBASIC20.99■□□□□ 0.95
PLOD3O60568 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.99■□□□□ 0.95
PLOD3O60568 AC079630.1-202ENST00000618127 1840 ntBASIC20.99■□□□□ 0.95
PLOD3O60568 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PLOD3O60568 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PLOD3O60568 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PLOD3O60568 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PLOD3O60568 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PLOD3O60568 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.98■□□□□ 0.95
PLOD3O60568 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.98■□□□□ 0.95
PLOD3O60568 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PLOD3O60568 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PLOD3O60568 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.97■□□□□ 0.95
PLOD3O60568 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.97■□□□□ 0.95
PLOD3O60568 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.97■□□□□ 0.95
PLOD3O60568 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.97■□□□□ 0.95
PLOD3O60568 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.97■□□□□ 0.95
PLOD3O60568 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PLOD3O60568 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PLOD3O60568 AC068473.5-201ENST00000616428 2072 ntBASIC20.97■□□□□ 0.95
PLOD3O60568 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PLOD3O60568 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PLOD3O60568 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PLOD3O60568 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PLOD3O60568 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PLOD3O60568 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.96■□□□□ 0.95
PLOD3O60568 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms