Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 LINC00526-201ENST00000581067 1875 ntBASIC19.7■□□□□ 0.74
GMDSO60547 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GMDSO60547 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GMDSO60547 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.69■□□□□ 0.74
GMDSO60547 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.69■□□□□ 0.74
GMDSO60547 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GMDSO60547 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GMDSO60547 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GMDSO60547 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.69■□□□□ 0.74
GMDSO60547 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GMDSO60547 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GMDSO60547 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GMDSO60547 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.69■□□□□ 0.74
GMDSO60547 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GMDSO60547 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GMDSO60547 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.68■□□□□ 0.74
GMDSO60547 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GMDSO60547 RARRES2P1-201ENST00000474487 481 ntBASIC19.68■□□□□ 0.74
GMDSO60547 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.68■□□□□ 0.74
GMDSO60547 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.68■□□□□ 0.74
GMDSO60547 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GMDSO60547 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GMDSO60547 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
GMDSO60547 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GMDSO60547 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.68■□□□□ 0.74
GMDSO60547 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GMDSO60547 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GMDSO60547 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GMDSO60547 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.67■□□□□ 0.74
GMDSO60547 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GMDSO60547 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.67■□□□□ 0.74
GMDSO60547 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GMDSO60547 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GMDSO60547 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.67■□□□□ 0.74
GMDSO60547 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GMDSO60547 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.67■□□□□ 0.74
GMDSO60547 AC137630.3-201ENST00000607245 391 ntBASIC19.67■□□□□ 0.74
GMDSO60547 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GMDSO60547 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.67■□□□□ 0.74
GMDSO60547 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GMDSO60547 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GMDSO60547 AC007375.3-201ENST00000600936 2314 ntBASIC19.67■□□□□ 0.74
GMDSO60547 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GMDSO60547 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GMDSO60547 AF131216.4-201ENST00000638924 1588 ntBASIC19.66■□□□□ 0.74
GMDSO60547 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.66■□□□□ 0.74
GMDSO60547 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
GMDSO60547 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.66■□□□□ 0.74
GMDSO60547 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.66■□□□□ 0.74
GMDSO60547 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GMDSO60547 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.66■□□□□ 0.74
GMDSO60547 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
GMDSO60547 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.65■□□□□ 0.74
GMDSO60547 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 AC131274.2-201ENST00000580697 1507 ntBASIC19.65■□□□□ 0.74
GMDSO60547 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GMDSO60547 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.64■□□□□ 0.73
GMDSO60547 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.64■□□□□ 0.73
GMDSO60547 AC137767.1-201ENST00000602918 1920 ntBASIC19.64■□□□□ 0.73
GMDSO60547 GUSBP5-202ENST00000510805 1989 ntBASIC19.64■□□□□ 0.73
GMDSO60547 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.64■□□□□ 0.73
GMDSO60547 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
GMDSO60547 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.63■□□□□ 0.73
GMDSO60547 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GMDSO60547 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.63■□□□□ 0.73
GMDSO60547 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GMDSO60547 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GMDSO60547 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
GMDSO60547 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
GMDSO60547 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GMDSO60547 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GMDSO60547 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GMDSO60547 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.63■□□□□ 0.73
GMDSO60547 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GMDSO60547 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
GMDSO60547 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms