Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
GSC2O15499 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
GSC2O15499 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
GSC2O15499 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.58■■□□□ 1.04
GSC2O15499 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
GSC2O15499 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
GSC2O15499 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GSC2O15499 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GSC2O15499 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
GSC2O15499 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
GSC2O15499 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GSC2O15499 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GSC2O15499 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GSC2O15499 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GSC2O15499 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GSC2O15499 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.56■■□□□ 1.04
GSC2O15499 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.56■■□□□ 1.04
GSC2O15499 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
GSC2O15499 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GSC2O15499 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
GSC2O15499 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.56■■□□□ 1.04
GSC2O15499 PKD1P6-201ENST00000343738 4769 ntBASIC21.56■■□□□ 1.04
GSC2O15499 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GSC2O15499 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.55■■□□□ 1.04
GSC2O15499 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GSC2O15499 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
GSC2O15499 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GSC2O15499 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
GSC2O15499 KRT18P10-201ENST00000388836 1287 ntBASIC21.55■■□□□ 1.04
GSC2O15499 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.55■■□□□ 1.04
GSC2O15499 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.55■■□□□ 1.04
GSC2O15499 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GSC2O15499 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
GSC2O15499 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GSC2O15499 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GSC2O15499 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
GSC2O15499 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GSC2O15499 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.55■■□□□ 1.04
GSC2O15499 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
GSC2O15499 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 AC090877.2-201ENST00000558441 1738 ntBASIC21.54■■□□□ 1.04
GSC2O15499 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
GSC2O15499 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GSC2O15499 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
GSC2O15499 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.53■■□□□ 1.04
GSC2O15499 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GSC2O15499 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GSC2O15499 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GSC2O15499 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
GSC2O15499 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GSC2O15499 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GSC2O15499 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.53■■□□□ 1.04
GSC2O15499 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GSC2O15499 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
GSC2O15499 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
GSC2O15499 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GSC2O15499 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GSC2O15499 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.52■■□□□ 1.04
GSC2O15499 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
GSC2O15499 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.52■■□□□ 1.04
GSC2O15499 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
GSC2O15499 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GSC2O15499 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
GSC2O15499 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GSC2O15499 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.52■■□□□ 1.04
GSC2O15499 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GSC2O15499 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GSC2O15499 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GSC2O15499 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
GSC2O15499 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.51■■□□□ 1.03
GSC2O15499 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GSC2O15499 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GSC2O15499 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GSC2O15499 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
GSC2O15499 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.51■■□□□ 1.03
GSC2O15499 FAM99A-202ENST00000538190 1989 ntBASIC21.51■■□□□ 1.03
GSC2O15499 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GSC2O15499 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.51■■□□□ 1.03
GSC2O15499 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.51■■□□□ 1.03
GSC2O15499 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
GSC2O15499 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GSC2O15499 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.51■■□□□ 1.03
GSC2O15499 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GSC2O15499 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 299.9 ms