Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNPHO15079 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNPHO15079 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNPHO15079 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SNPHO15079 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SNPHO15079 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNPHO15079 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.91■□□□□ 0.94
SNPHO15079 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNPHO15079 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNPHO15079 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.91■□□□□ 0.94
SNPHO15079 AL117328.2-201ENST00000624617 1940 ntBASIC20.91■□□□□ 0.94
SNPHO15079 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNPHO15079 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.91■□□□□ 0.94
SNPHO15079 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNPHO15079 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNPHO15079 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNPHO15079 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.9■□□□□ 0.94
SNPHO15079 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.9■□□□□ 0.94
SNPHO15079 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNPHO15079 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNPHO15079 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNPHO15079 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SNPHO15079 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SNPHO15079 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNPHO15079 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.9■□□□□ 0.94
SNPHO15079 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.89■□□□□ 0.94
SNPHO15079 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SNPHO15079 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNPHO15079 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNPHO15079 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNPHO15079 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNPHO15079 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SNPHO15079 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNPHO15079 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.89■□□□□ 0.93
SNPHO15079 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.89■□□□□ 0.93
SNPHO15079 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.89■□□□□ 0.93
SNPHO15079 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SNPHO15079 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.89■□□□□ 0.93
SNPHO15079 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SNPHO15079 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SNPHO15079 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 AL117332.1-201ENST00000622628 974 ntBASIC20.88■□□□□ 0.93
SNPHO15079 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNPHO15079 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.88■□□□□ 0.93
SNPHO15079 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SNPHO15079 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNPHO15079 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNPHO15079 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNPHO15079 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.87■□□□□ 0.93
SNPHO15079 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
SNPHO15079 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNPHO15079 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNPHO15079 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SNPHO15079 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.87■□□□□ 0.93
SNPHO15079 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.86■□□□□ 0.93
SNPHO15079 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.86■□□□□ 0.93
SNPHO15079 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.86■□□□□ 0.93
SNPHO15079 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNPHO15079 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNPHO15079 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNPHO15079 PKD1P6-201ENST00000343738 4769 ntBASIC20.86■□□□□ 0.93
SNPHO15079 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNPHO15079 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.86■□□□□ 0.93
SNPHO15079 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNPHO15079 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNPHO15079 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNPHO15079 LINC00565-201ENST00000562710 2331 ntBASIC20.86■□□□□ 0.93
SNPHO15079 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNPHO15079 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNPHO15079 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNPHO15079 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNPHO15079 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SNPHO15079 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNPHO15079 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SNPHO15079 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.85■□□□□ 0.93
SNPHO15079 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNPHO15079 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.85■□□□□ 0.93
SNPHO15079 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNPHO15079 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.85■□□□□ 0.93
SNPHO15079 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.85■□□□□ 0.93
SNPHO15079 MIR3621-201ENST00000580529 85 ntBASIC20.85■□□□□ 0.93
SNPHO15079 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNPHO15079 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SNPHO15079 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.85■□□□□ 0.93
SNPHO15079 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.85■□□□□ 0.93
SNPHO15079 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNPHO15079 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNPHO15079 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNPHO15079 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SNPHO15079 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.84■□□□□ 0.93
SNPHO15079 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SNPHO15079 AC005703.6-201ENST00000623265 1329 ntBASIC20.84■□□□□ 0.93
SNPHO15079 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms