Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC39.07■■■■□ 3.85
CUX2O14529 AC131274.2-201ENST00000580697 1507 ntBASIC39.07■■■■□ 3.84
CUX2O14529 AC096887.2-201ENST00000623443 1957 ntBASIC39.07■■■■□ 3.84
CUX2O14529 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC39.07■■■■□ 3.84
CUX2O14529 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
CUX2O14529 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC39.06■■■■□ 3.84
CUX2O14529 AC073210.2-201ENST00000430369 194 ntBASIC39.05■■■■□ 3.84
CUX2O14529 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC39.05■■■■□ 3.84
CUX2O14529 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
CUX2O14529 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
CUX2O14529 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC39.05■■■■□ 3.84
CUX2O14529 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC39.05■■■■□ 3.84
CUX2O14529 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC39.05■■■■□ 3.84
CUX2O14529 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
CUX2O14529 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
CUX2O14529 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC39.05■■■■□ 3.84
CUX2O14529 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC39.05■■■■□ 3.84
CUX2O14529 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC39.05■■■■□ 3.84
CUX2O14529 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
CUX2O14529 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC39.04■■■■□ 3.84
CUX2O14529 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
CUX2O14529 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC39.04■■■■□ 3.84
CUX2O14529 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC39.04■■■■□ 3.84
CUX2O14529 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC39.04■■■■□ 3.84
CUX2O14529 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
CUX2O14529 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC39.04■■■■□ 3.84
CUX2O14529 OAS3-207ENST00000551007 998 ntTSL 2 BASIC39.04■■■■□ 3.84
CUX2O14529 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC39.03■■■■□ 3.84
CUX2O14529 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC39.03■■■■□ 3.84
CUX2O14529 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
CUX2O14529 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
CUX2O14529 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
CUX2O14529 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
CUX2O14529 AP006294.2-201ENST00000641667 209 ntBASIC39.03■■■■□ 3.84
CUX2O14529 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
CUX2O14529 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC39.02■■■■□ 3.84
CUX2O14529 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
CUX2O14529 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
CUX2O14529 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC39.02■■■■□ 3.84
CUX2O14529 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC39.02■■■■□ 3.84
CUX2O14529 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC39.02■■■■□ 3.84
CUX2O14529 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC39.02■■■■□ 3.84
CUX2O14529 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
CUX2O14529 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC39.01■■■■□ 3.84
CUX2O14529 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC39.01■■■■□ 3.84
CUX2O14529 KRT19P1-201ENST00000405746 1186 ntBASIC39■■■■□ 3.83
CUX2O14529 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC39■■■■□ 3.83
CUX2O14529 DUX4L4-201ENST00000566884 1269 ntBASIC39■■■■□ 3.83
CUX2O14529 MIR1224-201ENST00000408193 85 ntBASIC38.99■■■■□ 3.83
CUX2O14529 NKILA-201ENST00000613231 537 ntTSL 4 BASIC38.99■■■■□ 3.83
CUX2O14529 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
CUX2O14529 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC38.98■■■■□ 3.83
CUX2O14529 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
CUX2O14529 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC38.98■■■■□ 3.83
CUX2O14529 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
CUX2O14529 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC38.98■■■■□ 3.83
CUX2O14529 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC38.98■■■■□ 3.83
CUX2O14529 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC38.97■■■■□ 3.83
CUX2O14529 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC38.97■■■■□ 3.83
CUX2O14529 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC38.97■■■■□ 3.83
CUX2O14529 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
CUX2O14529 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC38.97■■■■□ 3.83
CUX2O14529 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
CUX2O14529 CASP6-205ENST00000505486 538 ntTSL 4 BASIC38.97■■■■□ 3.83
CUX2O14529 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC38.97■■■■□ 3.83
CUX2O14529 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC38.97■■■■□ 3.83
CUX2O14529 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC38.96■■■■□ 3.83
CUX2O14529 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC38.96■■■■□ 3.83
CUX2O14529 SLC29A4P1-201ENST00000398760 971 ntBASIC38.96■■■■□ 3.83
CUX2O14529 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC38.96■■■■□ 3.83
CUX2O14529 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC38.96■■■■□ 3.83
CUX2O14529 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC38.96■■■■□ 3.83
CUX2O14529 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC38.95■■■■□ 3.83
CUX2O14529 GCSHP5-201ENST00000443090 522 ntBASIC38.95■■■■□ 3.83
CUX2O14529 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC38.95■■■■□ 3.83
CUX2O14529 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC38.95■■■■□ 3.83
CUX2O14529 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC38.95■■■■□ 3.83
CUX2O14529 AC098934.4-201ENST00000564127 592 ntBASIC38.95■■■■□ 3.83
CUX2O14529 MFSD11-216ENST00000590393 1141 ntBASIC38.95■■■■□ 3.83
CUX2O14529 PFKL-212ENST00000628044 129 ntTSL 3 BASIC38.95■■■■□ 3.83
CUX2O14529 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC38.95■■■■□ 3.83
CUX2O14529 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
CUX2O14529 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC38.95■■■■□ 3.83
CUX2O14529 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC38.95■■■■□ 3.83
CUX2O14529 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC38.94■■■■□ 3.82
CUX2O14529 AC091060.1-201ENST00000623524 1766 ntBASIC38.94■■■■□ 3.82
CUX2O14529 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
CUX2O14529 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
CUX2O14529 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC38.94■■■■□ 3.82
CUX2O14529 AC133041.1-202ENST00000642053 222 ntBASIC38.94■■■■□ 3.82
CUX2O14529 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC38.94■■■■□ 3.82
CUX2O14529 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
CUX2O14529 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC38.93■■■■□ 3.82
CUX2O14529 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
CUX2O14529 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC38.92■■■■□ 3.82
CUX2O14529 SPI1-203ENST00000533030 661 ntTSL 2 BASIC38.92■■■■□ 3.82
CUX2O14529 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC38.92■■■■□ 3.82
CUX2O14529 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC38.92■■■■□ 3.82
CUX2O14529 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC38.92■■■■□ 3.82
CUX2O14529 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC38.92■■■■□ 3.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms