Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC33A1O00400 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SLC33A1O00400 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC33A1O00400 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC33A1O00400 AL031848.2-201ENST00000607670 837 ntBASIC19.03■□□□□ 0.64
SLC33A1O00400 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC33A1O00400 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC33A1O00400 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC33A1O00400 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC33A1O00400 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC33A1O00400 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC33A1O00400 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC33A1O00400 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC33A1O00400 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC33A1O00400 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC33A1O00400 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC33A1O00400 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC33A1O00400 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC33A1O00400 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC33A1O00400 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.02■□□□□ 0.63
SLC33A1O00400 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC33A1O00400 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC33A1O00400 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
SLC33A1O00400 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC33A1O00400 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC33A1O00400 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC33A1O00400 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC33A1O00400 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC33A1O00400 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC33A1O00400 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC33A1O00400 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC33A1O00400 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC33A1O00400 H19-210ENST00000439725 1929 ntTSL 2 BASIC19■□□□□ 0.63
SLC33A1O00400 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19■□□□□ 0.63
SLC33A1O00400 AC137630.3-201ENST00000607245 391 ntBASIC19■□□□□ 0.63
SLC33A1O00400 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC33A1O00400 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC33A1O00400 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC33A1O00400 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC33A1O00400 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SLC33A1O00400 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SLC33A1O00400 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLC33A1O00400 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC33A1O00400 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SLC33A1O00400 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLC33A1O00400 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.99■□□□□ 0.63
SLC33A1O00400 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SLC33A1O00400 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC33A1O00400 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC33A1O00400 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC33A1O00400 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC33A1O00400 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC33A1O00400 SNX5-217ENST00000606557 1087 ntBASIC18.98■□□□□ 0.63
SLC33A1O00400 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC33A1O00400 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SLC33A1O00400 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC33A1O00400 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC33A1O00400 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 DUSP8P3-201ENST00000399571 1760 ntBASIC18.97■□□□□ 0.63
SLC33A1O00400 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC33A1O00400 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC33A1O00400 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC33A1O00400 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC33A1O00400 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC33A1O00400 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC33A1O00400 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SLC33A1O00400 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC33A1O00400 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC33A1O00400 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLC33A1O00400 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC33A1O00400 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC33A1O00400 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC33A1O00400 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms