Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TNFRSF11BO00300 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF11BO00300 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF11BO00300 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.7■□□□□ 0.9
TNFRSF11BO00300 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF11BO00300 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF11BO00300 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF11BO00300 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF11BO00300 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
TNFRSF11BO00300 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF11BO00300 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF11BO00300 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.65■□□□□ 0.9
TNFRSF11BO00300 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF11BO00300 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TNFRSF11BO00300 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TNFRSF11BO00300 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNFRSF11BO00300 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF11BO00300 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF11BO00300 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 AC022616.5-201ENST00000518796 181 ntBASIC20.62■□□□□ 0.89
TNFRSF11BO00300 AC129492.7-201ENST00000622992 756 ntBASIC20.62■□□□□ 0.89
TNFRSF11BO00300 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF11BO00300 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms