Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TAF4O00268 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TAF4O00268 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TAF4O00268 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.78■■□□□ 1.08
TAF4O00268 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TAF4O00268 AL139125.2-201ENST00000623134 1869 ntBASIC21.78■■□□□ 1.08
TAF4O00268 AC136469.2-201ENST00000623944 1028 ntBASIC21.78■■□□□ 1.08
TAF4O00268 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.78■■□□□ 1.08
TAF4O00268 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TAF4O00268 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TAF4O00268 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TAF4O00268 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.77■■□□□ 1.08
TAF4O00268 BX842568.3-201ENST00000418104 571 ntBASIC21.77■■□□□ 1.08
TAF4O00268 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.77■■□□□ 1.08
TAF4O00268 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TAF4O00268 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TAF4O00268 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TAF4O00268 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TAF4O00268 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TAF4O00268 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
TAF4O00268 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TAF4O00268 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.76■■□□□ 1.07
TAF4O00268 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.76■■□□□ 1.07
TAF4O00268 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.76■■□□□ 1.07
TAF4O00268 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.76■■□□□ 1.07
TAF4O00268 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TAF4O00268 AC068473.5-201ENST00000616428 2072 ntBASIC21.76■■□□□ 1.07
TAF4O00268 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TAF4O00268 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.76■■□□□ 1.07
TAF4O00268 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.76■■□□□ 1.07
TAF4O00268 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 AC142472.1-201ENST00000612013 1741 ntBASIC21.75■■□□□ 1.07
TAF4O00268 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 AC123595.1-201ENST00000440769 1046 ntBASIC21.75■■□□□ 1.07
TAF4O00268 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.75■■□□□ 1.07
TAF4O00268 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.75■■□□□ 1.07
TAF4O00268 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.75■■□□□ 1.07
TAF4O00268 NTF6G-201ENST00000591094 616 ntBASIC21.75■■□□□ 1.07
TAF4O00268 AC245100.8-202ENST00000629247 1058 ntBASIC21.75■■□□□ 1.07
TAF4O00268 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TAF4O00268 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
TAF4O00268 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TAF4O00268 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.74■■□□□ 1.07
TAF4O00268 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.74■■□□□ 1.07
TAF4O00268 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.74■■□□□ 1.07
TAF4O00268 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.74■■□□□ 1.07
TAF4O00268 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.74■■□□□ 1.07
TAF4O00268 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.74■■□□□ 1.07
TAF4O00268 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.74■■□□□ 1.07
TAF4O00268 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.74■■□□□ 1.07
TAF4O00268 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TAF4O00268 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TAF4O00268 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TAF4O00268 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TAF4O00268 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.73■■□□□ 1.07
TAF4O00268 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.73■■□□□ 1.07
TAF4O00268 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.73■■□□□ 1.07
TAF4O00268 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.73■■□□□ 1.07
TAF4O00268 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.73■■□□□ 1.07
TAF4O00268 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TAF4O00268 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TAF4O00268 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TAF4O00268 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TAF4O00268 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TAF4O00268 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TAF4O00268 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TAF4O00268 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TAF4O00268 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TAF4O00268 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TAF4O00268 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TAF4O00268 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TAF4O00268 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TAF4O00268 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.72■■□□□ 1.07
TAF4O00268 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
TAF4O00268 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TAF4O00268 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TAF4O00268 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TAF4O00268 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TAF4O00268 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TAF4O00268 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.71■■□□□ 1.07
TAF4O00268 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TAF4O00268 AC027612.3-201ENST00000413684 1047 ntBASIC21.71■■□□□ 1.07
TAF4O00268 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.71■■□□□ 1.07
TAF4O00268 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms