Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC12.59□□□□□ -0.39
CHKB-CPT1BH3BT56 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.58□□□□□ -0.39
CHKB-CPT1BH3BT56 FLJ16779-201ENST00000612722 7638 ntBASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 HTR7P1-202ENST00000624664 4411 ntBASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 AC018358.1-201ENST00000631079 1402 ntBASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 AC073130.3-201ENST00000624389 2278 ntBASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHKB-CPT1BH3BT56 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 LINC01124-201ENST00000409786 2117 ntBASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHKB-CPT1BH3BT56 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 AL137060.1-201ENST00000618151 2648 ntBASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CHKB-CPT1BH3BT56 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CHKB-CPT1BH3BT56 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
CHKB-CPT1BH3BT56 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms