Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF223E7ERA6 DUSP8P4-201ENST00000399538 1761 ntBASIC18.68■□□□□ 0.58
RNF223E7ERA6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF223E7ERA6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF223E7ERA6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF223E7ERA6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF223E7ERA6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF223E7ERA6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF223E7ERA6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF223E7ERA6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF223E7ERA6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF223E7ERA6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF223E7ERA6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF223E7ERA6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 TERF1P2-201ENST00000583350 1212 ntBASIC18.66■□□□□ 0.58
RNF223E7ERA6 AC010525.1-201ENST00000585559 441 ntBASIC18.66■□□□□ 0.58
RNF223E7ERA6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
RNF223E7ERA6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF223E7ERA6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF223E7ERA6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF223E7ERA6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF223E7ERA6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF223E7ERA6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF223E7ERA6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF223E7ERA6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF223E7ERA6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF223E7ERA6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF223E7ERA6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF223E7ERA6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF223E7ERA6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF223E7ERA6 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.64■□□□□ 0.57
RNF223E7ERA6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF223E7ERA6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RNF223E7ERA6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF223E7ERA6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF223E7ERA6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF223E7ERA6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF223E7ERA6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RNF223E7ERA6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF223E7ERA6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF223E7ERA6 HLA-L-209ENST00000420110 1011 ntBASIC18.63■□□□□ 0.57
RNF223E7ERA6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF223E7ERA6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF223E7ERA6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF223E7ERA6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF223E7ERA6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF223E7ERA6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF223E7ERA6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF223E7ERA6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF223E7ERA6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF223E7ERA6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF223E7ERA6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF223E7ERA6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RNF223E7ERA6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF223E7ERA6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF223E7ERA6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF223E7ERA6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF223E7ERA6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF223E7ERA6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF223E7ERA6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF223E7ERA6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF223E7ERA6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF223E7ERA6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF223E7ERA6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF223E7ERA6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF223E7ERA6 AC091060.1-201ENST00000623524 1766 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms