Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01548A6NM66 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01548A6NM66 UNC93B3-201ENST00000308076 687 ntBASIC17.71■□□□□ 0.43
LINC01548A6NM66 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC01548A6NM66 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01548A6NM66 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC01548A6NM66 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LINC01548A6NM66 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
LINC01548A6NM66 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01548A6NM66 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC01548A6NM66 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01548A6NM66 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01548A6NM66 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01548A6NM66 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01548A6NM66 AC110285.6-201ENST00000617652 491 ntBASIC17.7■□□□□ 0.42
LINC01548A6NM66 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01548A6NM66 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01548A6NM66 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC01548A6NM66 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01548A6NM66 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01548A6NM66 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.69■□□□□ 0.42
LINC01548A6NM66 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
LINC01548A6NM66 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01548A6NM66 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01548A6NM66 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01548A6NM66 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01548A6NM66 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01548A6NM66 ANOS2P-203ENST00000472227 1816 ntBASIC17.69■□□□□ 0.42
LINC01548A6NM66 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01548A6NM66 AC144652.1-201ENST00000609974 1624 ntBASIC17.69■□□□□ 0.42
LINC01548A6NM66 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01548A6NM66 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01548A6NM66 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC01548A6NM66 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01548A6NM66 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC01548A6NM66 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01548A6NM66 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC01548A6NM66 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LINC01548A6NM66 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC01548A6NM66 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01548A6NM66 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC01548A6NM66 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 SERBP1P1-201ENST00000396021 1160 ntBASIC17.67■□□□□ 0.42
LINC01548A6NM66 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LINC01548A6NM66 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 AC009086.3-201ENST00000623486 1008 ntBASIC17.67■□□□□ 0.42
LINC01548A6NM66 AC241377.3-202ENST00000626088 1088 ntBASIC17.67■□□□□ 0.42
LINC01548A6NM66 AC241585.3-202ENST00000628937 1088 ntBASIC17.67■□□□□ 0.42
LINC01548A6NM66 AC245100.8-202ENST00000629247 1058 ntBASIC17.67■□□□□ 0.42
LINC01548A6NM66 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC01548A6NM66 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01548A6NM66 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC01548A6NM66 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.67■□□□□ 0.42
LINC01548A6NM66 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC01548A6NM66 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.66■□□□□ 0.42
LINC01548A6NM66 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC01548A6NM66 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01548A6NM66 AL353803.4-201ENST00000565882 1934 ntBASIC17.66■□□□□ 0.42
LINC01548A6NM66 SYT6-210ENST00000641643 1587 ntBASIC17.66■□□□□ 0.42
LINC01548A6NM66 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01548A6NM66 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01548A6NM66 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01548A6NM66 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01548A6NM66 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01548A6NM66 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
LINC01548A6NM66 PBX2P1-201ENST00000493219 1291 ntBASIC17.65■□□□□ 0.42
LINC01548A6NM66 AL139246.5-201ENST00000606645 996 ntBASIC17.65■□□□□ 0.42
LINC01548A6NM66 AL136162.1-201ENST00000607711 1078 ntBASIC17.65■□□□□ 0.42
LINC01548A6NM66 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LINC01548A6NM66 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LINC01548A6NM66 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01548A6NM66 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01548A6NM66 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01548A6NM66 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01548A6NM66 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01548A6NM66 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01548A6NM66 FP325331.1-202ENST00000623531 1380 ntBASIC17.65■□□□□ 0.42
LINC01548A6NM66 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.64■□□□□ 0.42
LINC01548A6NM66 LINC01529-204ENST00000636474 1715 ntBASIC17.64■□□□□ 0.41
LINC01548A6NM66 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01548A6NM66 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01548A6NM66 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01548A6NM66 AC024257.2-201ENST00000549699 147 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms