Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF25A6NGN4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF25A6NGN4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF25A6NGN4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 MIR6722-201ENST00000617286 78 ntBASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
PRAMEF25A6NGN4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF25A6NGN4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF25A6NGN4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF25A6NGN4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.01■□□□□ 0.95
PRAMEF25A6NGN4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF25A6NGN4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF25A6NGN4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF25A6NGN4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF25A6NGN4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF25A6NGN4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 ALDH1A3-203ENST00000557963 1670 ntBASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF25A6NGN4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 MIR6724-1-201ENST00000616420 92 ntBASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 MIR6724-2-201ENST00000616483 92 ntBASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 MIR6724-4-201ENST00000617390 92 ntBASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 MIR6724-3-201ENST00000622482 92 ntBASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF25A6NGN4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF25A6NGN4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 CLDN5-201ENST00000403084 2357 ntBASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms