Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 AL022069.1-201ENST00000568025 1636 ntBASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 TERF1P2-201ENST00000583350 1212 ntBASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 AC080038.1-201ENST00000611274 1154 ntBASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRABD2BA6NFA1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 LINC02228-203ENST00000641970 1355 ntBASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.55■■□□□ 1.04
TRABD2BA6NFA1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRABD2BA6NFA1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.53■■□□□ 1.04
TRABD2BA6NFA1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRABD2BA6NFA1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.52■■□□□ 1.03
TRABD2BA6NFA1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRABD2BA6NFA1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRABD2BA6NFA1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRABD2BA6NFA1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRABD2BA6NFA1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
TRABD2BA6NFA1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.51■■□□□ 1.03
TRABD2BA6NFA1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.51■■□□□ 1.03
TRABD2BA6NFA1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.51■■□□□ 1.03
TRABD2BA6NFA1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.5■■□□□ 1.03
TRABD2BA6NFA1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRABD2BA6NFA1 ABHD17AP1-201ENST00000358206 933 ntBASIC21.5■■□□□ 1.03
TRABD2BA6NFA1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRABD2BA6NFA1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRABD2BA6NFA1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.5■■□□□ 1.03
TRABD2BA6NFA1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRABD2BA6NFA1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms