Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 LINC01529-204ENST00000636474 1715 ntBASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 MIR6821-201ENST00000617625 74 ntBASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD3L4A6NDZ8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 AC097381.1-201ENST00000429019 1296 ntBASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 AL139125.2-201ENST00000623134 1869 ntBASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L4A6NDZ8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3L4A6NDZ8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3L4A6NDZ8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3L4A6NDZ8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3L4A6NDZ8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3L4A6NDZ8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.83■□□□□ 0.77
MBD3L4A6NDZ8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.83■□□□□ 0.77
MBD3L4A6NDZ8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3L4A6NDZ8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.83■□□□□ 0.76
MBD3L4A6NDZ8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3L4A6NDZ8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.83■□□□□ 0.76
MBD3L4A6NDZ8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 OR2I1P-207ENST00000453522 948 ntBASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.82■□□□□ 0.76
MBD3L4A6NDZ8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L4A6NDZ8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L4A6NDZ8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 TSPY26P-201ENST00000476365 1326 ntBASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 IGHV3-19-201ENST00000521488 291 ntBASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms