Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TCRBV9S1A1TA0A576 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.59■■□□□ 1.21
TCRBV9S1A1TA0A576 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.59■■□□□ 1.21
TCRBV9S1A1TA0A576 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TCRBV9S1A1TA0A576 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 AC010980.1-201ENST00000587192 1142 ntBASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 AC242852.2-201ENST00000615738 1807 ntBASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV9S1A1TA0A576 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
TCRBV9S1A1TA0A576 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV9S1A1TA0A576 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV9S1A1TA0A576 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TCRBV9S1A1TA0A576 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 TSPY13P-201ENST00000338964 914 ntBASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.54■■□□□ 1.2
TCRBV9S1A1TA0A576 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV9S1A1TA0A576 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TCRBV9S1A1TA0A576 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TCRBV9S1A1TA0A576 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.52■■□□□ 1.2
TCRBV9S1A1TA0A576 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.52■■□□□ 1.2
TCRBV9S1A1TA0A576 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.52■■□□□ 1.2
TCRBV9S1A1TA0A576 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
TCRBV9S1A1TA0A576 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.52■■□□□ 1.19
TCRBV9S1A1TA0A576 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV9S1A1TA0A576 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV9S1A1TA0A576 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV9S1A1TA0A576 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV9S1A1TA0A576 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms