Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 HLA-V-202ENST00000446817 847 ntBASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 MIR3960-201ENST00000583311 91 ntBASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV12-1A0A0B4J245 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-1A0A0B4J245 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-1A0A0B4J245 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-1A0A0B4J245 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-1A0A0B4J245 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-1A0A0B4J245 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-1A0A0B4J245 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-1A0A0B4J245 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-1A0A0B4J245 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 LINC01971-201ENST00000617888 1048 ntBASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-1A0A0B4J245 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-1A0A0B4J245 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 KRT18P10-201ENST00000388836 1287 ntBASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-1A0A0B4J245 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms