Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 LINC00565-201ENST00000562710 2331 ntBASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 AL592293.1-201ENST00000502889 1188 ntBASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 AC087393.1-201ENST00000582896 145 ntBASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-1A0A0B4J241 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 SPCS2P3-201ENST00000500401 656 ntBASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 MIR6765-201ENST00000614092 87 ntBASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV13-1A0A0B4J241 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 RNF126P1-201ENST00000567452 1320 ntBASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV13-1A0A0B4J241 GUSBP5-202ENST00000510805 1989 ntBASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV13-1A0A0B4J241 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV13-1A0A0B4J241 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-1A0A0B4J241 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms