Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MRPL54Q6P161 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
MRPL54Q6P161 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MRPL54Q6P161 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
MRPL54Q6P161 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL54Q6P161 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL54Q6P161 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL54Q6P161 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MRPL54Q6P161 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL54Q6P161 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL54Q6P161 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL54Q6P161 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21■□□□□ 0.95
MRPL54Q6P161 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21■□□□□ 0.95
MRPL54Q6P161 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21■□□□□ 0.95
MRPL54Q6P161 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPL54Q6P161 ABCB10P3-201ENST00000561950 2166 ntBASIC20.99■□□□□ 0.95
MRPL54Q6P161 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPL54Q6P161 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL54Q6P161 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL54Q6P161 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MRPL54Q6P161 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL54Q6P161 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MRPL54Q6P161 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL54Q6P161 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL54Q6P161 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL54Q6P161 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MRPL54Q6P161 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.93■□□□□ 0.94
MRPL54Q6P161 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MRPL54Q6P161 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.91■□□□□ 0.94
MRPL54Q6P161 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MRPL54Q6P161 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
MRPL54Q6P161 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MRPL54Q6P161 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MRPL54Q6P161 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MRPL54Q6P161 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MRPL54Q6P161 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.9■□□□□ 0.94
MRPL54Q6P161 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MRPL54Q6P161 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MRPL54Q6P161 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MRPL54Q6P161 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MRPL54Q6P161 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
MRPL54Q6P161 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MRPL54Q6P161 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MRPL54Q6P161 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.83■□□□□ 0.93
MRPL54Q6P161 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRPL54Q6P161 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL54Q6P161 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL54Q6P161 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL54Q6P161 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL54Q6P161 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL54Q6P161 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL54Q6P161 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL54Q6P161 AC139426.1-201ENST00000568218 2529 ntBASIC20.79■□□□□ 0.92
MRPL54Q6P161 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL54Q6P161 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL54Q6P161 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL54Q6P161 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL54Q6P161 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.78■□□□□ 0.92
MRPL54Q6P161 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL54Q6P161 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL54Q6P161 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL54Q6P161 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL54Q6P161 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.74■□□□□ 0.91
MRPL54Q6P161 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL54Q6P161 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL54Q6P161 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL54Q6P161 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL54Q6P161 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.73■□□□□ 0.91
MRPL54Q6P161 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL54Q6P161 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL54Q6P161 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MRPL54Q6P161 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MRPL54Q6P161 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MRPL54Q6P161 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL54Q6P161 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL54Q6P161 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MRPL54Q6P161 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL54Q6P161 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
MRPL54Q6P161 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL54Q6P161 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL54Q6P161 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.61■□□□□ 0.89
MRPL54Q6P161 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL54Q6P161 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL54Q6P161 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.6■□□□□ 0.89
MRPL54Q6P161 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.59■□□□□ 0.89
MRPL54Q6P161 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL54Q6P161 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL54Q6P161 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL54Q6P161 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
MRPL54Q6P161 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.58■□□□□ 0.88
MRPL54Q6P161 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL54Q6P161 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL54Q6P161 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL54Q6P161 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL54Q6P161 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL54Q6P161 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL54Q6P161 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL54Q6P161 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MRPL54Q6P161 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL54Q6P161 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 7.1 ms