Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 BNA2YJR078W 1362 nt7.64□□□□□ -1.19
LSM6Q06406 YLL053CYLL053C 459 nt7.64□□□□□ -1.19
LSM6Q06406 GBP2YCL011C 1284 nt7.64□□□□□ -1.19
LSM6Q06406 IDH1YNL037C 1083 nt7.62□□□□□ -1.19
LSM6Q06406 AGP1YCL025C 1902 nt7.62□□□□□ -1.19
LSM6Q06406 INA1YLR413W 2028 nt7.61□□□□□ -1.19
LSM6Q06406 RIM8YGL045W 1629 nt7.6□□□□□ -1.19
LSM6Q06406 MIC12YBR262C 321 nt7.58□□□□□ -1.2
LSM6Q06406 RNQ1YCL028W 1218 nt7.58□□□□□ -1.2
LSM6Q06406 RPC82YPR190C 1965 nt7.57□□□□□ -1.2
LSM6Q06406 SOR2YDL246C 1074 nt7.56□□□□□ -1.2
LSM6Q06406 SOR1YJR159W 1074 nt7.56□□□□□ -1.2
LSM6Q06406 DDR2YOL052C-A 186 nt7.56□□□□□ -1.2
LSM6Q06406 YGL114WYGL114W 2178 nt7.56□□□□□ -1.2
LSM6Q06406 FTR1YER145C 1215 nt7.55□□□□□ -1.2
LSM6Q06406 YDL086C-AYDL086C-A 435 nt7.54□□□□□ -1.2
LSM6Q06406 ANP1YEL036C 1503 nt7.51□□□□□ -1.21
LSM6Q06406 TRM5YHR070W 1500 nt7.51□□□□□ -1.21
LSM6Q06406 RDN18-1RDN18-1 1800 nt7.5□□□□□ -1.21
LSM6Q06406 RDN18-2RDN18-2 1800 nt7.5□□□□□ -1.21
LSM6Q06406 HHO1YPL127C 777 nt7.5□□□□□ -1.21
LSM6Q06406 YCL042WYCL042W 360 nt7.5□□□□□ -1.21
LSM6Q06406 MAE1YKL029C 2010 nt7.5□□□□□ -1.21
LSM6Q06406 GAL1YBR020W 1587 nt7.5□□□□□ -1.21
LSM6Q06406 MET2YNL277W 1461 nt7.49□□□□□ -1.21
LSM6Q06406 RTN2YDL204W 1182 nt7.49□□□□□ -1.21
LSM6Q06406 YOL037CYOL037C 354 nt7.49□□□□□ -1.21
LSM6Q06406 GPI16YHR188C 1833 nt7.48□□□□□ -1.21
LSM6Q06406 STR3YGL184C 1398 nt7.47□□□□□ -1.21
LSM6Q06406 GDH3YAL062W 1374 nt7.46□□□□□ -1.21
LSM6Q06406 MUP1YGR055W 1725 nt7.45□□□□□ -1.22
LSM6Q06406 XDJ1YLR090W 1380 nt7.44□□□□□ -1.22
LSM6Q06406 YGR201CYGR201C 678 nt7.43□□□□□ -1.22
LSM6Q06406 WHI5YOR083W 888 nt7.41□□□□□ -1.22
LSM6Q06406 LPX1YOR084W 1164 nt7.41□□□□□ -1.22
LSM6Q06406 AQY2YLL052C 450 nt7.4□□□□□ -1.22
LSM6Q06406 AQY1YPR192W 918 nt7.4□□□□□ -1.22
LSM6Q06406 HIF1YLL022C 1158 nt7.38□□□□□ -1.23
LSM6Q06406 SFP1YLR403W 2052 nt7.38□□□□□ -1.23
LSM6Q06406 FEN2YCR028C 1539 nt7.37□□□□□ -1.23
LSM6Q06406 DIC1YLR348C 897 nt7.36□□□□□ -1.23
LSM6Q06406 ACO2YJL200C 2370 nt7.35□□□□□ -1.23
LSM6Q06406 ALD4YOR374W 1560 nt7.35□□□□□ -1.23
LSM6Q06406 YDR524C-BYDR524C-B 201 nt7.35□□□□□ -1.23
LSM6Q06406 HOL1YNR055C 1761 nt7.35□□□□□ -1.23
LSM6Q06406 YDR433WYDR433W 441 nt7.33□□□□□ -1.24
LSM6Q06406 SPC25YER018C 666 nt7.33□□□□□ -1.24
LSM6Q06406 STB1YNL309W 1263 nt7.33□□□□□ -1.24
LSM6Q06406 MXR2YCL033C 507 nt7.32□□□□□ -1.24
LSM6Q06406 YIR016WYIR016W 798 nt7.31□□□□□ -1.24
LSM6Q06406 DUT1YBR252W 444 nt7.31□□□□□ -1.24
LSM6Q06406 FRD1YEL047C 1413 nt7.29□□□□□ -1.24
LSM6Q06406 NPP1YCR026C 2229 nt7.29□□□□□ -1.24
LSM6Q06406 ZRT3YKL175W 1512 nt7.28□□□□□ -1.24
LSM6Q06406 GOR1YNL274C 1053 nt7.28□□□□□ -1.24
LSM6Q06406 PRM5YIL117C 957 nt7.26□□□□□ -1.25
LSM6Q06406 AVT6YER119C 1347 nt7.25□□□□□ -1.25
LSM6Q06406 UGA4YDL210W 1716 nt7.24□□□□□ -1.25
LSM6Q06406 YMR209CYMR209C 1374 nt7.24□□□□□ -1.25
LSM6Q06406 GID7YCL039W 2238 nt7.24□□□□□ -1.25
LSM6Q06406 TPO4YOR273C 1980 nt7.24□□□□□ -1.25
LSM6Q06406 FMP45YDL222C 930 nt7.23□□□□□ -1.25
LSM6Q06406 VPS60YDR486C 690 nt7.23□□□□□ -1.25
LSM6Q06406 PLB1YMR008C 1995 nt7.22□□□□□ -1.25
LSM6Q06406 HMG2YLR450W 3138 nt7.21□□□□□ -1.25
LSM6Q06406 ILV3YJR016C 1758 nt7.21□□□□□ -1.25
LSM6Q06406 HIS2YFR025C 1008 nt7.21□□□□□ -1.26
LSM6Q06406 YNL024CYNL024C 741 nt7.21□□□□□ -1.26
LSM6Q06406 CCT4YDL143W 1587 nt7.18□□□□□ -1.26
LSM6Q06406 YJL067WYJL067W 351 nt7.17□□□□□ -1.26
LSM6Q06406 YKR040CYKR040C 504 nt7.17□□□□□ -1.26
LSM6Q06406 ALG3YBL082C 1377 nt7.17□□□□□ -1.26
LSM6Q06406 YHL008CYHL008C 1884 nt7.17□□□□□ -1.26
LSM6Q06406 SWC5YBR231C 912 nt7.16□□□□□ -1.26
LSM6Q06406 ARP6YLR085C 1317 nt7.16□□□□□ -1.26
LSM6Q06406 ERV46YAL042W 1248 nt7.15□□□□□ -1.26
LSM6Q06406 YKL097CYKL097C 411 nt7.15□□□□□ -1.26
LSM6Q06406 SSN3YPL042C 1668 nt7.15□□□□□ -1.27
LSM6Q06406 SAM35YHR083W 990 nt7.14□□□□□ -1.27
LSM6Q06406 PSD1YNL169C 1503 nt7.13□□□□□ -1.27
LSM6Q06406 UGP1YKL035W 1500 nt7.12□□□□□ -1.27
LSM6Q06406 COQ8YGL119W 1506 nt7.11□□□□□ -1.27
LSM6Q06406 CYT1YOR065W 930 nt7.11□□□□□ -1.27
LSM6Q06406 YLR179CYLR179C 606 nt7.1□□□□□ -1.27
LSM6Q06406 YIL100C-AYIL100C-A 339 nt7.09□□□□□ -1.27
LSM6Q06406 TIM23YNR017W 669 nt7.09□□□□□ -1.27
LSM6Q06406 YOR325WYOR325W 474 nt7.09□□□□□ -1.27
LSM6Q06406 UTR1YJR049C 1593 nt7.08□□□□□ -1.28
LSM6Q06406 HXK1YFR053C 1458 nt7.08□□□□□ -1.28
LSM6Q06406 OPI10YOL032W 741 nt7.06□□□□□ -1.28
LSM6Q06406 URA8YJR103W 1737 nt7.06□□□□□ -1.28
LSM6Q06406 AHT1YHR093W 549 nt7.05□□□□□ -1.28
LSM6Q06406 NBP35YGL091C 987 nt7.04□□□□□ -1.28
LSM6Q06406 DAT1YML113W 747 nt7.04□□□□□ -1.28
LSM6Q06406 ALD5YER073W 1563 nt7.03□□□□□ -1.28
LSM6Q06406 ARO8YGL202W 1503 nt7.03□□□□□ -1.28
LSM6Q06406 DMA2YNL116W 1569 nt7.03□□□□□ -1.28
LSM6Q06406 KES1YPL145C 1305 nt7.02□□□□□ -1.28
LSM6Q06406 Q0182Q0182 405 nt7.02□□□□□ -1.29
LSM6Q06406 SGA1YIL099W 1650 nt7.01□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms