Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 TRM5YHR070W 1500 nt17.41■□□□□ 0.38
RKR1Q04781 YLR415CYLR415C 339 nt17.41■□□□□ 0.38
RKR1Q04781 AQY1YPR192W 918 nt17.41■□□□□ 0.38
RKR1Q04781 SIM1YIL123W 1431 nt17.33■□□□□ 0.37
RKR1Q04781 YDR524C-BYDR524C-B 201 nt17.32■□□□□ 0.36
RKR1Q04781 SWC5YBR231C 912 nt17.32■□□□□ 0.36
RKR1Q04781 ATF2YGR177C 1608 nt17.3■□□□□ 0.36
RKR1Q04781 THI74YDR438W 1113 nt17.28■□□□□ 0.36
RKR1Q04781 CCT4YDL143W 1587 nt17.28■□□□□ 0.36
RKR1Q04781 STB1YNL309W 1263 nt17.28■□□□□ 0.36
RKR1Q04781 GLR1YPL091W 1452 nt17.26■□□□□ 0.35
RKR1Q04781 SPC25YER018C 666 nt17.23■□□□□ 0.35
RKR1Q04781 VPS75YNL246W 795 nt17.23■□□□□ 0.35
RKR1Q04781 YHL050CYHL050C 2094 nt17.22■□□□□ 0.35
RKR1Q04781 RBG2YGR173W 1107 nt17.22■□□□□ 0.35
RKR1Q04781 VPS60YDR486C 690 nt17.21■□□□□ 0.35
RKR1Q04781 ALG3YBL082C 1377 nt17.2■□□□□ 0.34
RKR1Q04781 GPI16YHR188C 1833 nt17.2■□□□□ 0.34
RKR1Q04781 DDR2YOL052C-A 186 nt17.15■□□□□ 0.34
RKR1Q04781 CRR1YLR213C 1269 nt17.12■□□□□ 0.33
RKR1Q04781 ERF2YLR246W 1080 nt17.09■□□□□ 0.33
RKR1Q04781 DAT1YML113W 747 nt17.08■□□□□ 0.32
RKR1Q04781 SPT8YLR055C 1809 nt17.06■□□□□ 0.32
RKR1Q04781 YFL067WYFL067W 528 nt17.04■□□□□ 0.32
RKR1Q04781 YDL086C-AYDL086C-A 435 nt17■□□□□ 0.31
RKR1Q04781 PAU7YAR020C 168 nt17■□□□□ 0.31
RKR1Q04781 ANP1YEL036C 1503 nt16.99■□□□□ 0.31
RKR1Q04781 MIC10YCL057C-A 294 nt16.98■□□□□ 0.31
RKR1Q04781 SHB17YKR043C 816 nt16.95■□□□□ 0.3
RKR1Q04781 RAD51YER095W 1203 nt16.94■□□□□ 0.3
RKR1Q04781 FEN2YCR028C 1539 nt16.93■□□□□ 0.3
RKR1Q04781 YGL034CYGL034C 366 nt16.93■□□□□ 0.3
RKR1Q04781 NDI1YML120C 1542 nt16.92■□□□□ 0.3
RKR1Q04781 UBA4YHR111W 1323 nt16.92■□□□□ 0.3
RKR1Q04781 TIM17YJL143W 477 nt16.9■□□□□ 0.3
RKR1Q04781 SNG1YGR197C 1644 nt16.89■□□□□ 0.29
RKR1Q04781 RPM1RPM1 483 nt16.88■□□□□ 0.29
RKR1Q04781 RBG1YAL036C 1110 nt16.85■□□□□ 0.29
RKR1Q04781 XYL2YLR070C 1071 nt16.81■□□□□ 0.28
RKR1Q04781 SGT2YOR007C 1041 nt16.81■□□□□ 0.28
RKR1Q04781 YDR010CYDR010C 333 nt16.78■□□□□ 0.28
RKR1Q04781 YSR3YKR053C 1215 nt16.77■□□□□ 0.28
RKR1Q04781 HEM12YDR047W 1089 nt16.77■□□□□ 0.27
RKR1Q04781 SAM1YLR180W 1149 nt16.76■□□□□ 0.27
RKR1Q04781 YIR016WYIR016W 798 nt16.75■□□□□ 0.27
RKR1Q04781 SHM2YLR058C 1410 nt16.75■□□□□ 0.27
RKR1Q04781 XDJ1YLR090W 1380 nt16.69■□□□□ 0.26
RKR1Q04781 LYS4YDR234W 2082 nt16.65■□□□□ 0.26
RKR1Q04781 SEC11YIR022W 504 nt16.64■□□□□ 0.25
RKR1Q04781 NIT1YIL164C 600 nt16.64■□□□□ 0.25
RKR1Q04781 PHO89YBR296C 1725 nt16.63■□□□□ 0.25
RKR1Q04781 AIM45YPR004C 1035 nt16.61■□□□□ 0.25
RKR1Q04781 RET2YFR051C 1641 nt16.6■□□□□ 0.25
RKR1Q04781 NCP1YHR042W 2076 nt16.56■□□□□ 0.24
RKR1Q04781 YNR029CYNR029C 1290 nt16.54■□□□□ 0.24
RKR1Q04781 PCH2YBR186W 1695 nt16.51■□□□□ 0.23
RKR1Q04781 BDF1YLR399C 2061 nt16.49■□□□□ 0.23
RKR1Q04781 YCR087WYCR087W 516 nt16.48■□□□□ 0.23
RKR1Q04781 MIC12YBR262C 321 nt16.43■□□□□ 0.22
RKR1Q04781 TAT1YBR069C 1860 nt16.43■□□□□ 0.22
RKR1Q04781 ADH7YCR105W 1086 nt16.43■□□□□ 0.22
RKR1Q04781 YMR226CYMR226C 804 nt16.43■□□□□ 0.22
RKR1Q04781 COQ2YNR041C 1119 nt16.43■□□□□ 0.22
RKR1Q04781 BNA2YJR078W 1362 nt16.42■□□□□ 0.22
RKR1Q04781 GDH3YAL062W 1374 nt16.41■□□□□ 0.22
RKR1Q04781 YHR056W-AYHR056W-A 435 nt16.39■□□□□ 0.21
RKR1Q04781 YLR349WYLR349W 507 nt16.38■□□□□ 0.21
RKR1Q04781 YLR111WYLR111W 333 nt16.38■□□□□ 0.21
RKR1Q04781 YGR201CYGR201C 678 nt16.35■□□□□ 0.21
RKR1Q04781 SDH5YOL071W 489 nt16.35■□□□□ 0.21
RKR1Q04781 BOP3YNL042W 1191 nt16.34■□□□□ 0.21
RKR1Q04781 GUT2YIL155C 1950 nt16.34■□□□□ 0.21
RKR1Q04781 STE4YOR212W 1272 nt16.33■□□□□ 0.2
RKR1Q04781 RTF1YGL244W 1677 nt16.3■□□□□ 0.2
RKR1Q04781 AVT6YER119C 1347 nt16.3■□□□□ 0.2
RKR1Q04781 MRP20YDR405W 792 nt16.29■□□□□ 0.2
RKR1Q04781 SFA1YDL168W 1161 nt16.26■□□□□ 0.19
RKR1Q04781 CAB5YDR196C 726 nt16.26■□□□□ 0.19
RKR1Q04781 YHL019W-AYHL019W-A 594 nt16.26■□□□□ 0.19
RKR1Q04781 PAU15YIR041W 375 nt16.26■□□□□ 0.19
RKR1Q04781 HHO1YPL127C 777 nt16.22■□□□□ 0.19
RKR1Q04781 YLR279WYLR279W 390 nt16.21■□□□□ 0.19
RKR1Q04781 PIB2YGL023C 1908 nt16.19■□□□□ 0.18
RKR1Q04781 RPS14BYJL191W 417 nt16.15■□□□□ 0.18
RKR1Q04781 AGP1YCL025C 1902 nt16.09■□□□□ 0.17
RKR1Q04781 RPL4BYDR012W 1089 nt16.09■□□□□ 0.17
RKR1Q04781 RPL4AYBR031W 1089 nt16.09■□□□□ 0.17
RKR1Q04781 DUT1YBR252W 444 nt16.09■□□□□ 0.17
RKR1Q04781 RAX1YOR301W 1308 nt16.08■□□□□ 0.16
RKR1Q04781 SHH4YLR164W 507 nt16.06■□□□□ 0.16
RKR1Q04781 YLR437C-AYLR437C-A 228 nt16.04■□□□□ 0.16
RKR1Q04781 GOR1YNL274C 1053 nt16■□□□□ 0.15
RKR1Q04781 YCR102CYCR102C 1107 nt15.97■□□□□ 0.15
RKR1Q04781 PTK1YKL198C 1989 nt15.97■□□□□ 0.15
RKR1Q04781 YGR012WYGR012W 1182 nt15.96■□□□□ 0.15
RKR1Q04781 CCA1YER168C 1641 nt15.95■□□□□ 0.14
RKR1Q04781 FUN14YAL008W 597 nt15.93■□□□□ 0.14
RKR1Q04781 YFL054CYFL054C 1941 nt15.93■□□□□ 0.14
RKR1Q04781 RAD23YEL037C 1197 nt15.92■□□□□ 0.14
RKR1Q04781 PEX2YJL210W 816 nt15.92■□□□□ 0.14
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms