Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 VPS75YNL246W 795 nt16.77■□□□□ 0.27
TY1B-JR2P47100 AQY1YPR192W 918 nt16.77■□□□□ 0.27
TY1B-JR2P47100 SWC5YBR231C 912 nt16.77■□□□□ 0.27
TY1B-JR2P47100 YDR524C-BYDR524C-B 201 nt16.76■□□□□ 0.27
TY1B-JR2P47100 ATF2YGR177C 1608 nt16.75■□□□□ 0.27
TY1B-JR2P47100 RBG2YGR173W 1107 nt16.74■□□□□ 0.27
TY1B-JR2P47100 CCT4YDL143W 1587 nt16.71■□□□□ 0.27
TY1B-JR2P47100 RRT12YCR045C 1476 nt16.71■□□□□ 0.27
TY1B-JR2P47100 ALG3YBL082C 1377 nt16.65■□□□□ 0.26
TY1B-JR2P47100 YBR220CYBR220C 1683 nt16.65■□□□□ 0.26
TY1B-JR2P47100 STB1YNL309W 1263 nt16.64■□□□□ 0.25
TY1B-JR2P47100 SPC25YER018C 666 nt16.64■□□□□ 0.25
TY1B-JR2P47100 DAT1YML113W 747 nt16.62■□□□□ 0.25
TY1B-JR2P47100 YNL195CYNL195C 786 nt16.61■□□□□ 0.25
TY1B-JR2P47100 NDI1YML120C 1542 nt16.61■□□□□ 0.25
TY1B-JR2P47100 VPS60YDR486C 690 nt16.61■□□□□ 0.25
TY1B-JR2P47100 SIM1YIL123W 1431 nt16.6■□□□□ 0.25
TY1B-JR2P47100 GPI16YHR188C 1833 nt16.6■□□□□ 0.25
TY1B-JR2P47100 DDR2YOL052C-A 186 nt16.57■□□□□ 0.24
TY1B-JR2P47100 SPT8YLR055C 1809 nt16.55■□□□□ 0.24
TY1B-JR2P47100 RAD51YER095W 1203 nt16.51■□□□□ 0.23
TY1B-JR2P47100 RBG1YAL036C 1110 nt16.51■□□□□ 0.23
TY1B-JR2P47100 PAU7YAR020C 168 nt16.51■□□□□ 0.23
TY1B-JR2P47100 UBA4YHR111W 1323 nt16.48■□□□□ 0.23
TY1B-JR2P47100 YGL034CYGL034C 366 nt16.48■□□□□ 0.23
TY1B-JR2P47100 SSA4YER103W 1929 nt16.47■□□□□ 0.23
TY1B-JR2P47100 SHB17YKR043C 816 nt16.47■□□□□ 0.23
TY1B-JR2P47100 YFL067WYFL067W 528 nt16.45■□□□□ 0.22
TY1B-JR2P47100 CRR1YLR213C 1269 nt16.43■□□□□ 0.22
TY1B-JR2P47100 YHL050CYHL050C 2094 nt16.43■□□□□ 0.22
TY1B-JR2P47100 XYL2YLR070C 1071 nt16.43■□□□□ 0.22
TY1B-JR2P47100 ERF2YLR246W 1080 nt16.38■□□□□ 0.21
TY1B-JR2P47100 YDL086C-AYDL086C-A 435 nt16.38■□□□□ 0.21
TY1B-JR2P47100 TIM17YJL143W 477 nt16.38■□□□□ 0.21
TY1B-JR2P47100 MIC10YCL057C-A 294 nt16.36■□□□□ 0.21
TY1B-JR2P47100 ANP1YEL036C 1503 nt16.36■□□□□ 0.21
TY1B-JR2P47100 YDR010CYDR010C 333 nt16.33■□□□□ 0.2
TY1B-JR2P47100 SGT2YOR007C 1041 nt16.32■□□□□ 0.2
TY1B-JR2P47100 FEN2YCR028C 1539 nt16.3■□□□□ 0.2
TY1B-JR2P47100 YSR3YKR053C 1215 nt16.22■□□□□ 0.19
TY1B-JR2P47100 SNG1YGR197C 1644 nt16.2■□□□□ 0.18
TY1B-JR2P47100 AIM45YPR004C 1035 nt16.19■□□□□ 0.18
TY1B-JR2P47100 SHM2YLR058C 1410 nt16.19■□□□□ 0.18
TY1B-JR2P47100 SAM1YLR180W 1149 nt16.17■□□□□ 0.18
TY1B-JR2P47100 PHO89YBR296C 1725 nt16.14■□□□□ 0.17
TY1B-JR2P47100 YIR016WYIR016W 798 nt16.13■□□□□ 0.17
TY1B-JR2P47100 RET2YFR051C 1641 nt16.13■□□□□ 0.17
TY1B-JR2P47100 RPM1RPM1 483 nt16.12■□□□□ 0.17
TY1B-JR2P47100 NIT1YIL164C 600 nt16.1■□□□□ 0.17
TY1B-JR2P47100 XDJ1YLR090W 1380 nt16.07■□□□□ 0.16
TY1B-JR2P47100 CAB5YDR196C 726 nt16.04■□□□□ 0.16
TY1B-JR2P47100 YNR029CYNR029C 1290 nt16.04■□□□□ 0.16
TY1B-JR2P47100 SDH5YOL071W 489 nt16.03■□□□□ 0.16
TY1B-JR2P47100 HEM12YDR047W 1089 nt16.02■□□□□ 0.15
TY1B-JR2P47100 YLR111WYLR111W 333 nt15.99■□□□□ 0.15
TY1B-JR2P47100 COQ2YNR041C 1119 nt15.99■□□□□ 0.15
TY1B-JR2P47100 ADH7YCR105W 1086 nt15.98■□□□□ 0.15
TY1B-JR2P47100 YCR087WYCR087W 516 nt15.95■□□□□ 0.14
TY1B-JR2P47100 LYS4YDR234W 2082 nt15.91■□□□□ 0.14
TY1B-JR2P47100 YLR349WYLR349W 507 nt15.91■□□□□ 0.14
TY1B-JR2P47100 YMR226CYMR226C 804 nt15.88■□□□□ 0.13
TY1B-JR2P47100 YLR279WYLR279W 390 nt15.87■□□□□ 0.13
TY1B-JR2P47100 PAU15YIR041W 375 nt15.79■□□□□ 0.12
TY1B-JR2P47100 STE4YOR212W 1272 nt15.79■□□□□ 0.12
TY1B-JR2P47100 GDH3YAL062W 1374 nt15.79■□□□□ 0.12
TY1B-JR2P47100 YHL019W-AYHL019W-A 594 nt15.78■□□□□ 0.12
TY1B-JR2P47100 SFA1YDL168W 1161 nt15.77■□□□□ 0.12
TY1B-JR2P47100 MRP20YDR405W 792 nt15.77■□□□□ 0.12
TY1B-JR2P47100 RPS14BYJL191W 417 nt15.75■□□□□ 0.11
TY1B-JR2P47100 YLR437C-AYLR437C-A 228 nt15.73■□□□□ 0.11
TY1B-JR2P47100 MIC12YBR262C 321 nt15.73■□□□□ 0.11
TY1B-JR2P47100 YGR201CYGR201C 678 nt15.72■□□□□ 0.11
TY1B-JR2P47100 NCP1YHR042W 2076 nt15.72■□□□□ 0.11
TY1B-JR2P47100 BNA2YJR078W 1362 nt15.69■□□□□ 0.1
TY1B-JR2P47100 AVT6YER119C 1347 nt15.68■□□□□ 0.1
TY1B-JR2P47100 SEC11YIR022W 504 nt15.65■□□□□ 0.1
TY1B-JR2P47100 RPL4BYDR012W 1089 nt15.59■□□□□ 0.09
TY1B-JR2P47100 RPL4AYBR031W 1089 nt15.59■□□□□ 0.09
TY1B-JR2P47100 PCH2YBR186W 1695 nt15.57■□□□□ 0.08
TY1B-JR2P47100 HHO1YPL127C 777 nt15.56■□□□□ 0.08
TY1B-JR2P47100 YGR012WYGR012W 1182 nt15.55■□□□□ 0.08
TY1B-JR2P47100 YHR056W-AYHR056W-A 435 nt15.55■□□□□ 0.08
TY1B-JR2P47100 RAD23YEL037C 1197 nt15.52■□□□□ 0.07
TY1B-JR2P47100 SHH4YLR164W 507 nt15.52■□□□□ 0.07
TY1B-JR2P47100 FUN14YAL008W 597 nt15.5■□□□□ 0.07
TY1B-JR2P47100 BDF1YLR399C 2061 nt15.47■□□□□ 0.07
TY1B-JR2P47100 GPN2YOR262W 1044 nt15.46■□□□□ 0.07
TY1B-JR2P47100 BOP3YNL042W 1191 nt15.45■□□□□ 0.06
TY1B-JR2P47100 AGP1YCL025C 1902 nt15.44■□□□□ 0.06
TY1B-JR2P47100 TAT1YBR069C 1860 nt15.43■□□□□ 0.06
TY1B-JR2P47100 DUT1YBR252W 444 nt15.43■□□□□ 0.06
TY1B-JR2P47100 MSB4YOL112W 1479 nt15.42■□□□□ 0.06
TY1B-JR2P47100 tS(GCU)LtS(GCU)L 80 nt15.41■□□□□ 0.06
TY1B-JR2P47100 RTF1YGL244W 1677 nt15.41■□□□□ 0.06
TY1B-JR2P47100 PEX2YJL210W 816 nt15.4■□□□□ 0.06
TY1B-JR2P47100 TSC10YBR265W 963 nt15.39■□□□□ 0.05
TY1B-JR2P47100 ADH1YOL086C 1047 nt15.37■□□□□ 0.05
TY1B-JR2P47100 GUT2YIL155C 1950 nt15.36■□□□□ 0.05
TY1B-JR2P47100 TOM6YOR045W 186 nt15.36■□□□□ 0.05
TY1B-JR2P47100 NRT1YOR071C 1797 nt15.36■□□□□ 0.05
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms