Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 HEL2YDR266C 1920 nt9.54□□□□□ -0.88
LSM1P47017 YFL067WYFL067W 528 nt9.53□□□□□ -0.88
LSM1P47017 CCA1YER168C 1641 nt9.53□□□□□ -0.88
LSM1P47017 RDN25-1RDN25-1 3396 nt9.52□□□□□ -0.89
LSM1P47017 RDN25-2RDN25-2 3396 nt9.52□□□□□ -0.89
LSM1P47017 MIC10YCL057C-A 294 nt9.5□□□□□ -0.89
LSM1P47017 ATF2YGR177C 1608 nt9.49□□□□□ -0.89
LSM1P47017 IRC24YIR036C 792 nt9.49□□□□□ -0.89
LSM1P47017 YKR040CYKR040C 504 nt9.49□□□□□ -0.89
LSM1P47017 ERV46YAL042W 1248 nt9.48□□□□□ -0.89
LSM1P47017 SNG1YGR197C 1644 nt9.47□□□□□ -0.89
LSM1P47017 FTR1YER145C 1215 nt9.47□□□□□ -0.89
LSM1P47017 DDR2YOL052C-A 186 nt9.47□□□□□ -0.89
LSM1P47017 FRD1YEL047C 1413 nt9.46□□□□□ -0.9
LSM1P47017 NDI1YML120C 1542 nt9.46□□□□□ -0.9
LSM1P47017 LPX1YOR084W 1164 nt9.45□□□□□ -0.9
LSM1P47017 BNA2YJR078W 1362 nt9.44□□□□□ -0.9
LSM1P47017 TRM5YHR070W 1500 nt9.43□□□□□ -0.9
LSM1P47017 YGR259CYGR259C 441 nt9.43□□□□□ -0.9
LSM1P47017 DIC1YLR348C 897 nt9.43□□□□□ -0.9
LSM1P47017 YPR011CYPR011C 981 nt9.43□□□□□ -0.9
LSM1P47017 GAL1YBR020W 1587 nt9.42□□□□□ -0.9
LSM1P47017 WSC2YNL283C 1512 nt9.42□□□□□ -0.9
LSM1P47017 tM(CAU)CtM(CAU)C 72 nt9.42□□□□□ -0.9
LSM1P47017 IMT4tM(CAU)E 72 nt9.42□□□□□ -0.9
LSM1P47017 IMT3tM(CAU)J3 72 nt9.42□□□□□ -0.9
LSM1P47017 IMT1tM(CAU)O1 72 nt9.42□□□□□ -0.9
LSM1P47017 IMT2tM(CAU)P 72 nt9.42□□□□□ -0.9
LSM1P47017 YDL086C-AYDL086C-A 435 nt9.39□□□□□ -0.91
LSM1P47017 MET2YNL277W 1461 nt9.39□□□□□ -0.91
LSM1P47017 AQY1YPR192W 918 nt9.37□□□□□ -0.91
LSM1P47017 DUS1YML080W 1272 nt9.36□□□□□ -0.91
LSM1P47017 YAT1YAR035W 2064 nt9.35□□□□□ -0.91
LSM1P47017 ANP1YEL036C 1503 nt9.32□□□□□ -0.92
LSM1P47017 YCL074WYCL074W 927 nt9.32□□□□□ -0.92
LSM1P47017 SSN3YPL042C 1668 nt9.32□□□□□ -0.92
LSM1P47017 YDR524C-BYDR524C-B 201 nt9.29□□□□□ -0.92
LSM1P47017 FRE6YLL051C 2139 nt9.29□□□□□ -0.92
LSM1P47017 SPT20YOL148C 1815 nt9.28□□□□□ -0.92
LSM1P47017 STB1YNL309W 1263 nt9.28□□□□□ -0.92
LSM1P47017 HHO1YPL127C 777 nt9.27□□□□□ -0.93
LSM1P47017 MIC12YBR262C 321 nt9.27□□□□□ -0.93
LSM1P47017 GPI16YHR188C 1833 nt9.26□□□□□ -0.93
LSM1P47017 SFP1YLR403W 2052 nt9.26□□□□□ -0.93
LSM1P47017 SPC25YER018C 666 nt9.24□□□□□ -0.93
LSM1P47017 YLR235CYLR235C 399 nt9.24□□□□□ -0.93
LSM1P47017 FEN2YCR028C 1539 nt9.24□□□□□ -0.93
LSM1P47017 TIM23YNR017W 669 nt9.23□□□□□ -0.93
LSM1P47017 PTH1YHR189W 573 nt9.22□□□□□ -0.93
LSM1P47017 YLR179CYLR179C 606 nt9.22□□□□□ -0.93
LSM1P47017 AGP1YCL025C 1902 nt9.2□□□□□ -0.94
LSM1P47017 RIM8YGL045W 1629 nt9.18□□□□□ -0.94
LSM1P47017 YGR201CYGR201C 678 nt9.17□□□□□ -0.94
LSM1P47017 SWC5YBR231C 912 nt9.17□□□□□ -0.94
LSM1P47017 MAE1YKL029C 2010 nt9.17□□□□□ -0.94
LSM1P47017 INA1YLR413W 2028 nt9.17□□□□□ -0.94
LSM1P47017 YIR016WYIR016W 798 nt9.16□□□□□ -0.94
LSM1P47017 GID7YCL039W 2238 nt9.16□□□□□ -0.94
LSM1P47017 NPP1YCR026C 2229 nt9.15□□□□□ -0.94
LSM1P47017 VPS60YDR486C 690 nt9.15□□□□□ -0.94
LSM1P47017 CCT4YDL143W 1587 nt9.14□□□□□ -0.95
LSM1P47017 MOT3YMR070W 1473 nt9.13□□□□□ -0.95
LSM1P47017 YGL114WYGL114W 2178 nt9.09□□□□□ -0.95
LSM1P47017 RPC82YPR190C 1965 nt9.08□□□□□ -0.96
LSM1P47017 YPR064WYPR064W 420 nt9.08□□□□□ -0.96
LSM1P47017 AHT1YHR093W 549 nt9.07□□□□□ -0.96
LSM1P47017 AQY2YLL052C 450 nt9.07□□□□□ -0.96
LSM1P47017 XDJ1YLR090W 1380 nt9.07□□□□□ -0.96
LSM1P47017 ALG3YBL082C 1377 nt9.07□□□□□ -0.96
LSM1P47017 YKL030WYKL030W 606 nt9.06□□□□□ -0.96
LSM1P47017 GOR1YNL274C 1053 nt9.06□□□□□ -0.96
LSM1P47017 AVT6YER119C 1347 nt9.05□□□□□ -0.96
LSM1P47017 STR3YGL184C 1398 nt9.04□□□□□ -0.96
LSM1P47017 BSP1YPR171W 1731 nt9.04□□□□□ -0.96
LSM1P47017 SPP1YPL138C 1062 nt9.03□□□□□ -0.96
LSM1P47017 RDN18-1RDN18-1 1800 nt9.03□□□□□ -0.96
LSM1P47017 RDN18-2RDN18-2 1800 nt9.03□□□□□ -0.96
LSM1P47017 HMG2YLR450W 3138 nt9.02□□□□□ -0.97
LSM1P47017 RTN2YDL204W 1182 nt9.02□□□□□ -0.97
LSM1P47017 TPO4YOR273C 1980 nt9.02□□□□□ -0.97
LSM1P47017 UGA4YDL210W 1716 nt9□□□□□ -0.97
LSM1P47017 GDH3YAL062W 1374 nt8.99□□□□□ -0.97
LSM1P47017 MUP1YGR055W 1725 nt8.99□□□□□ -0.97
LSM1P47017 DUT1YBR252W 444 nt8.98□□□□□ -0.97
LSM1P47017 TAD3YLR316C 969 nt8.97□□□□□ -0.97
LSM1P47017 ACO2YJL200C 2370 nt8.94□□□□□ -0.98
LSM1P47017 UBX6YJL048C 1191 nt8.94□□□□□ -0.98
LSM1P47017 YLR415CYLR415C 339 nt8.9□□□□□ -0.98
LSM1P47017 ESBP6YNL125C 2022 nt8.89□□□□□ -0.99
LSM1P47017 TIM17YJL143W 477 nt8.89□□□□□ -0.99
LSM1P47017 HIF1YLL022C 1158 nt8.87□□□□□ -0.99
LSM1P47017 SHM2YLR058C 1410 nt8.86□□□□□ -0.99
LSM1P47017 URA8YJR103W 1737 nt8.85□□□□□ -0.99
LSM1P47017 ALD4YOR374W 1560 nt8.85□□□□□ -0.99
LSM1P47017 HOL1YNR055C 1761 nt8.83□□□□□ -1
LSM1P47017 BDH1YAL060W 1149 nt8.81□□□□□ -1
LSM1P47017 DAT1YML113W 747 nt8.81□□□□□ -1
LSM1P47017 ILV2YMR108W 2064 nt8.81□□□□□ -1
LSM1P47017 tL(GAG)GtL(GAG)G 82 nt8.79□□□□□ -1
LSM1P47017 YCR102CYCR102C 1107 nt8.78□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms