Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 GBP2YCL011C 1284 nt8.51□□□□□ -1.05
CDC40P40968 WSC2YNL283C 1512 nt8.5□□□□□ -1.05
CDC40P40968 PUS2YGL063W 1113 nt8.5□□□□□ -1.05
CDC40P40968 YGR259CYGR259C 441 nt8.5□□□□□ -1.05
CDC40P40968 MIC10YCL057C-A 294 nt8.5□□□□□ -1.05
CDC40P40968 UBX6YJL048C 1191 nt8.49□□□□□ -1.05
CDC40P40968 NDI1YML120C 1542 nt8.49□□□□□ -1.05
CDC40P40968 HEL2YDR266C 1920 nt8.48□□□□□ -1.05
CDC40P40968 HEM12YDR047W 1089 nt8.46□□□□□ -1.06
CDC40P40968 SNF6YHL025W 999 nt8.46□□□□□ -1.06
CDC40P40968 TCD2YKL027W 1344 nt8.46□□□□□ -1.06
CDC40P40968 ADH2YMR303C 1047 nt8.45□□□□□ -1.06
CDC40P40968 FMT1YBL013W 1206 nt8.43□□□□□ -1.06
CDC40P40968 YCL074WYCL074W 927 nt8.41□□□□□ -1.06
CDC40P40968 CWP1YKL096W 720 nt8.4□□□□□ -1.06
CDC40P40968 SNG1YGR197C 1644 nt8.4□□□□□ -1.07
CDC40P40968 YDR433WYDR433W 441 nt8.38□□□□□ -1.07
CDC40P40968 ATF2YGR177C 1608 nt8.38□□□□□ -1.07
CDC40P40968 DUS1YML080W 1272 nt8.37□□□□□ -1.07
CDC40P40968 AGP1YCL025C 1902 nt8.37□□□□□ -1.07
CDC40P40968 SPT20YOL148C 1815 nt8.36□□□□□ -1.07
CDC40P40968 ILV2YMR108W 2064 nt8.35□□□□□ -1.07
CDC40P40968 FMP45YDL222C 930 nt8.35□□□□□ -1.07
CDC40P40968 YPR011CYPR011C 981 nt8.35□□□□□ -1.07
CDC40P40968 NPP1YCR026C 2229 nt8.34□□□□□ -1.07
CDC40P40968 YIH1YCR059C 777 nt8.33□□□□□ -1.08
CDC40P40968 YLL053CYLL053C 459 nt8.33□□□□□ -1.08
CDC40P40968 DTR1YBR180W 1719 nt8.32□□□□□ -1.08
CDC40P40968 MXR2YCL033C 507 nt8.31□□□□□ -1.08
CDC40P40968 ERV46YAL042W 1248 nt8.3□□□□□ -1.08
CDC40P40968 YFL067WYFL067W 528 nt8.29□□□□□ -1.08
CDC40P40968 YKR040CYKR040C 504 nt8.29□□□□□ -1.08
CDC40P40968 RIM8YGL045W 1629 nt8.29□□□□□ -1.08
CDC40P40968 YCL042WYCL042W 360 nt8.28□□□□□ -1.08
CDC40P40968 SOR2YDL246C 1074 nt8.27□□□□□ -1.09
CDC40P40968 SOR1YJR159W 1074 nt8.27□□□□□ -1.09
CDC40P40968 LPX1YOR084W 1164 nt8.27□□□□□ -1.09
CDC40P40968 HEM14YER014W 1620 nt8.27□□□□□ -1.09
CDC40P40968 RPC82YPR190C 1965 nt8.27□□□□□ -1.09
CDC40P40968 MCM5YLR274W 2328 nt8.25□□□□□ -1.09
CDC40P40968 BNA2YJR078W 1362 nt8.25□□□□□ -1.09
CDC40P40968 MIC12YBR262C 321 nt8.24□□□□□ -1.09
CDC40P40968 SFP1YLR403W 2052 nt8.23□□□□□ -1.09
CDC40P40968 RNQ1YCL028W 1218 nt8.23□□□□□ -1.09
CDC40P40968 RDN18-1RDN18-1 1800 nt8.23□□□□□ -1.09
CDC40P40968 RDN18-2RDN18-2 1800 nt8.23□□□□□ -1.09
CDC40P40968 FTR1YER145C 1215 nt8.22□□□□□ -1.09
CDC40P40968 INA1YLR413W 2028 nt8.22□□□□□ -1.09
CDC40P40968 YGL114WYGL114W 2178 nt8.21□□□□□ -1.1
CDC40P40968 FRD1YEL047C 1413 nt8.2□□□□□ -1.1
CDC40P40968 TRM5YHR070W 1500 nt8.2□□□□□ -1.1
CDC40P40968 YDR510C-AYDR510C-A 117 nt8.2□□□□□ -1.1
CDC40P40968 DDR2YOL052C-A 186 nt8.19□□□□□ -1.1
CDC40P40968 GAL1YBR020W 1587 nt8.18□□□□□ -1.1
CDC40P40968 YDL086C-AYDL086C-A 435 nt8.18□□□□□ -1.1
CDC40P40968 MAE1YKL029C 2010 nt8.17□□□□□ -1.1
CDC40P40968 ANP1YEL036C 1503 nt8.17□□□□□ -1.1
CDC40P40968 STR3YGL184C 1398 nt8.16□□□□□ -1.1
CDC40P40968 MUP1YGR055W 1725 nt8.16□□□□□ -1.1
CDC40P40968 GPI16YHR188C 1833 nt8.15□□□□□ -1.1
CDC40P40968 MET2YNL277W 1461 nt8.14□□□□□ -1.11
CDC40P40968 HHO1YPL127C 777 nt8.14□□□□□ -1.11
CDC40P40968 XDJ1YLR090W 1380 nt8.13□□□□□ -1.11
CDC40P40968 GTB1YDR221W 2109 nt8.12□□□□□ -1.11
CDC40P40968 GDH3YAL062W 1374 nt8.11□□□□□ -1.11
CDC40P40968 MAS1YLR163C 1389 nt8.1□□□□□ -1.11
CDC40P40968 RTN2YDL204W 1182 nt8.09□□□□□ -1.11
CDC40P40968 MRPL8YJL063C 717 nt8.09□□□□□ -1.11
CDC40P40968 DIC1YLR348C 897 nt8.07□□□□□ -1.12
CDC40P40968 RSC4YKR008W 1878 nt8.06□□□□□ -1.12
CDC40P40968 DUT1YBR252W 444 nt8.06□□□□□ -1.12
CDC40P40968 HIF1YLL022C 1158 nt8.05□□□□□ -1.12
CDC40P40968 AQY2YLL052C 450 nt8.05□□□□□ -1.12
CDC40P40968 TOK1YJL093C 2076 nt8.05□□□□□ -1.12
CDC40P40968 HOL1YNR055C 1761 nt8.05□□□□□ -1.12
CDC40P40968 HMG2YLR450W 3138 nt8.03□□□□□ -1.12
CDC40P40968 ACO2YJL200C 2370 nt8.02□□□□□ -1.13
CDC40P40968 YGR201CYGR201C 678 nt8.02□□□□□ -1.13
CDC40P40968 FEN2YCR028C 1539 nt8.02□□□□□ -1.13
CDC40P40968 YLR235CYLR235C 399 nt8.01□□□□□ -1.13
CDC40P40968 YDR524C-BYDR524C-B 201 nt8□□□□□ -1.13
CDC40P40968 SPP1YPL138C 1062 nt8□□□□□ -1.13
CDC40P40968 PTH1YHR189W 573 nt7.99□□□□□ -1.13
CDC40P40968 AQY1YPR192W 918 nt7.99□□□□□ -1.13
CDC40P40968 ADO1YJR105W 1023 nt7.98□□□□□ -1.13
CDC40P40968 YIR016WYIR016W 798 nt7.97□□□□□ -1.13
CDC40P40968 STB1YNL309W 1263 nt7.97□□□□□ -1.13
CDC40P40968 TIM23YNR017W 669 nt7.97□□□□□ -1.13
CDC40P40968 GAL2YLR081W 1725 nt7.97□□□□□ -1.13
CDC40P40968 ALD4YOR374W 1560 nt7.97□□□□□ -1.13
CDC40P40968 SPC25YER018C 666 nt7.96□□□□□ -1.14
CDC40P40968 PRM5YIL117C 957 nt7.94□□□□□ -1.14
CDC40P40968 TPO4YOR273C 1980 nt7.93□□□□□ -1.14
CDC40P40968 YLR179CYLR179C 606 nt7.93□□□□□ -1.14
CDC40P40968 YKL030WYKL030W 606 nt7.91□□□□□ -1.14
CDC40P40968 YMR209CYMR209C 1374 nt7.91□□□□□ -1.14
CDC40P40968 UGA4YDL210W 1716 nt7.9□□□□□ -1.14
CDC40P40968 VPS60YDR486C 690 nt7.89□□□□□ -1.15
CDC40P40968 RTG1YOL067C 534 nt7.89□□□□□ -1.15
CDC40P40968 PLB1YMR008C 1995 nt7.88□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms