Protein–RNA interactions for Protein: P38842

YHR140W, UPF0641 membrane protein YHR140W, yeastyeast

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR140WP38842 DDR2YOL052C-A 186 nt8.33□□□□□ -1.08
YHR140WP38842 LPX1YOR084W 1164 nt8.32□□□□□ -1.08
YHR140WP38842 GAL1YBR020W 1587 nt8.31□□□□□ -1.08
YHR140WP38842 TRM5YHR070W 1500 nt8.3□□□□□ -1.08
YHR140WP38842 PRP4YPR178W 1398 nt8.3□□□□□ -1.08
YHR140WP38842 YDL086C-AYDL086C-A 435 nt8.29□□□□□ -1.08
YHR140WP38842 DIC1YLR348C 897 nt8.29□□□□□ -1.08
YHR140WP38842 YEL076C-AYEL076C-A 651 nt8.28□□□□□ -1.08
YHR140WP38842 YEL076CYEL076C 651 nt8.28□□□□□ -1.08
YHR140WP38842 YLR464WYLR464W 651 nt8.28□□□□□ -1.08
YHR140WP38842 AQY1YPR192W 918 nt8.27□□□□□ -1.09
YHR140WP38842 BNA2YJR078W 1362 nt8.26□□□□□ -1.09
YHR140WP38842 AAC1YMR056C 930 nt8.26□□□□□ -1.09
YHR140WP38842 ANP1YEL036C 1503 nt8.24□□□□□ -1.09
YHR140WP38842 DPS1YLL018C 1674 nt8.24□□□□□ -1.09
YHR140WP38842 BMT6YLR063W 1098 nt8.23□□□□□ -1.09
YHR140WP38842 WSC2YNL283C 1512 nt8.2□□□□□ -1.1
YHR140WP38842 MIC12YBR262C 321 nt8.2□□□□□ -1.1
YHR140WP38842 SPC25YER018C 666 nt8.18□□□□□ -1.1
YHR140WP38842 STB1YNL309W 1263 nt8.18□□□□□ -1.1
YHR140WP38842 YKR005CYKR005C 1578 nt8.18□□□□□ -1.1
YHR140WP38842 YDR524C-BYDR524C-B 201 nt8.17□□□□□ -1.1
YHR140WP38842 YCL074WYCL074W 927 nt8.16□□□□□ -1.1
YHR140WP38842 FEN2YCR028C 1539 nt8.16□□□□□ -1.1
YHR140WP38842 GPI16YHR188C 1833 nt8.15□□□□□ -1.1
YHR140WP38842 YLR235CYLR235C 399 nt8.15□□□□□ -1.1
YHR140WP38842 DUS1YML080W 1272 nt8.14□□□□□ -1.11
YHR140WP38842 HHO1YPL127C 777 nt8.14□□□□□ -1.11
YHR140WP38842 TIM23YNR017W 669 nt8.13□□□□□ -1.11
YHR140WP38842 AGP1YCL025C 1902 nt8.11□□□□□ -1.11
YHR140WP38842 YGR259CYGR259C 441 nt8.11□□□□□ -1.11
YHR140WP38842 YLR179CYLR179C 606 nt8.11□□□□□ -1.11
YHR140WP38842 YIR016WYIR016W 798 nt8.1□□□□□ -1.11
YHR140WP38842 NAR1YNL240C 1476 nt8.1□□□□□ -1.11
YHR140WP38842 PTH1YHR189W 573 nt8.09□□□□□ -1.11
YHR140WP38842 IRC24YIR036C 792 nt8.09□□□□□ -1.11
YHR140WP38842 YGR201CYGR201C 678 nt8.08□□□□□ -1.12
YHR140WP38842 CCT4YDL143W 1587 nt8.07□□□□□ -1.12
YHR140WP38842 BIO5YNR056C 1686 nt8.06□□□□□ -1.12
YHR140WP38842 SNF1YDR477W 1902 nt8.06□□□□□ -1.12
YHR140WP38842 VPS60YDR486C 690 nt8.06□□□□□ -1.12
YHR140WP38842 AHT1YHR093W 549 nt8.05□□□□□ -1.12
YHR140WP38842 SWC5YBR231C 912 nt8.03□□□□□ -1.12
YHR140WP38842 XDJ1YLR090W 1380 nt8.01□□□□□ -1.13
YHR140WP38842 CYT2YKL087C 675 nt8.01□□□□□ -1.13
YHR140WP38842 YPR064WYPR064W 420 nt8□□□□□ -1.13
YHR140WP38842 PBP1YGR178C 2169 nt8□□□□□ -1.13
YHR140WP38842 ALG3YBL082C 1377 nt7.99□□□□□ -1.13
YHR140WP38842 YKL030WYKL030W 606 nt7.99□□□□□ -1.13
YHR140WP38842 STR3YGL184C 1398 nt7.98□□□□□ -1.13
YHR140WP38842 SPP1YPL138C 1062 nt7.97□□□□□ -1.13
YHR140WP38842 RDN18-1RDN18-1 1800 nt7.96□□□□□ -1.13
YHR140WP38842 RDN18-2RDN18-2 1800 nt7.96□□□□□ -1.13
YHR140WP38842 GOR1YNL274C 1053 nt7.96□□□□□ -1.14
YHR140WP38842 HSL7YBR133C 2484 nt7.95□□□□□ -1.14
YHR140WP38842 CMP2YML057W 1815 nt7.94□□□□□ -1.14
YHR140WP38842 TAD3YLR316C 969 nt7.93□□□□□ -1.14
YHR140WP38842 AVT6YER119C 1347 nt7.93□□□□□ -1.14
YHR140WP38842 RTN2YDL204W 1182 nt7.92□□□□□ -1.14
YHR140WP38842 AQY2YLL052C 450 nt7.92□□□□□ -1.14
YHR140WP38842 FRE6YLL051C 2139 nt7.91□□□□□ -1.14
YHR140WP38842 DUT1YBR252W 444 nt7.91□□□□□ -1.14
YHR140WP38842 GDH3YAL062W 1374 nt7.91□□□□□ -1.14
YHR140WP38842 SSN3YPL042C 1668 nt7.91□□□□□ -1.14
YHR140WP38842 MOT3YMR070W 1473 nt7.87□□□□□ -1.15
YHR140WP38842 RDN25-1RDN25-1 3396 nt7.84□□□□□ -1.15
YHR140WP38842 RDN25-2RDN25-2 3396 nt7.84□□□□□ -1.15
YHR140WP38842 YLR415CYLR415C 339 nt7.83□□□□□ -1.16
YHR140WP38842 BDH1YAL060W 1149 nt7.81□□□□□ -1.16
YHR140WP38842 SHM2YLR058C 1410 nt7.8□□□□□ -1.16
YHR140WP38842 TIM17YJL143W 477 nt7.8□□□□□ -1.16
YHR140WP38842 DAT1YML113W 747 nt7.79□□□□□ -1.16
YHR140WP38842 HEL2YDR266C 1920 nt7.78□□□□□ -1.16
YHR140WP38842 NDI1YML120C 1542 nt7.77□□□□□ -1.17
YHR140WP38842 tL(GAG)GtL(GAG)G 82 nt7.76□□□□□ -1.17
YHR140WP38842 YCR102CYCR102C 1107 nt7.75□□□□□ -1.17
YHR140WP38842 ARP6YLR085C 1317 nt7.75□□□□□ -1.17
YHR140WP38842 NBP35YGL091C 987 nt7.73□□□□□ -1.17
YHR140WP38842 YAT1YAR035W 2064 nt7.73□□□□□ -1.17
YHR140WP38842 PLB1YMR008C 1995 nt7.73□□□□□ -1.17
YHR140WP38842 GID7YCL039W 2238 nt7.72□□□□□ -1.17
YHR140WP38842 NIT1YIL164C 600 nt7.71□□□□□ -1.18
YHR140WP38842 ALD4YOR374W 1560 nt7.71□□□□□ -1.18
YHR140WP38842 YSP3YOR003W 1437 nt7.7□□□□□ -1.18
YHR140WP38842 RTG1YOL067C 534 nt7.7□□□□□ -1.18
YHR140WP38842 HIF1YLL022C 1158 nt7.69□□□□□ -1.18
YHR140WP38842 SPT20YOL148C 1815 nt7.67□□□□□ -1.18
YHR140WP38842 INA1YLR413W 2028 nt7.67□□□□□ -1.18
YHR140WP38842 SGT2YOR007C 1041 nt7.66□□□□□ -1.18
YHR140WP38842 BSP1YPR171W 1731 nt7.66□□□□□ -1.18
YHR140WP38842 PRM5YIL117C 957 nt7.65□□□□□ -1.18
YHR140WP38842 LSC2YGR244C 1284 nt7.63□□□□□ -1.19
YHR140WP38842 HUA1YGR268C 597 nt7.63□□□□□ -1.19
YHR140WP38842 SAM35YHR083W 990 nt7.63□□□□□ -1.19
YHR140WP38842 YNL115CYNL115C 1935 nt7.6□□□□□ -1.19
YHR140WP38842 UTR1YJR049C 1593 nt7.59□□□□□ -1.19
YHR140WP38842 ZRT3YKL175W 1512 nt7.59□□□□□ -1.19
YHR140WP38842 TIR3YIL011W 810 nt7.59□□□□□ -1.19
YHR140WP38842 RPC82YPR190C 1965 nt7.59□□□□□ -1.2
YHR140WP38842 GAP1YKR039W 1809 nt7.58□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms