Protein–RNA interactions for Protein: P0CG63

UBI4, Polyubiquitin, yeastyeast

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBI4P0CG63 YGR259CYGR259C 441 nt9.12□□□□□ -0.95
UBI4P0CG63 MXR2YCL033C 507 nt9.11□□□□□ -0.95
UBI4P0CG63 BNA2YJR078W 1362 nt9.11□□□□□ -0.95
UBI4P0CG63 YCL074WYCL074W 927 nt9.1□□□□□ -0.95
UBI4P0CG63 IRC24YIR036C 792 nt9.1□□□□□ -0.95
UBI4P0CG63 GAL1YBR020W 1587 nt9.09□□□□□ -0.95
UBI4P0CG63 DUS1YML080W 1272 nt9.09□□□□□ -0.95
UBI4P0CG63 DDR2YOL052C-A 186 nt9.09□□□□□ -0.95
UBI4P0CG63 TRM5YHR070W 1500 nt9.09□□□□□ -0.95
UBI4P0CG63 YDL086C-AYDL086C-A 435 nt9.06□□□□□ -0.96
UBI4P0CG63 AGP1YCL025C 1902 nt9.05□□□□□ -0.96
UBI4P0CG63 CMP2YML057W 1815 nt9.04□□□□□ -0.96
UBI4P0CG63 FMP45YDL222C 930 nt9.04□□□□□ -0.96
UBI4P0CG63 MIC12YBR262C 321 nt9.04□□□□□ -0.96
UBI4P0CG63 ANP1YEL036C 1503 nt9.04□□□□□ -0.96
UBI4P0CG63 YOR139CYOR139C 393 nt9.03□□□□□ -0.96
UBI4P0CG63 FRD1YEL047C 1413 nt9.03□□□□□ -0.96
UBI4P0CG63 DIC1YLR348C 897 nt9.01□□□□□ -0.97
UBI4P0CG63 AQY1YPR192W 918 nt8.97□□□□□ -0.97
UBI4P0CG63 ERV46YAL042W 1248 nt8.96□□□□□ -0.98
UBI4P0CG63 HHO1YPL127C 777 nt8.95□□□□□ -0.98
UBI4P0CG63 PUS2YGL063W 1113 nt8.94□□□□□ -0.98
UBI4P0CG63 YKR040CYKR040C 504 nt8.94□□□□□ -0.98
UBI4P0CG63 RPM1RPM1 483 nt8.93□□□□□ -0.98
UBI4P0CG63 YDR524C-BYDR524C-B 201 nt8.92□□□□□ -0.98
UBI4P0CG63 FEN2YCR028C 1539 nt8.9□□□□□ -0.98
UBI4P0CG63 YAT1YAR035W 2064 nt8.9□□□□□ -0.98
UBI4P0CG63 STB1YNL309W 1263 nt8.9□□□□□ -0.98
UBI4P0CG63 LPX1YOR084W 1164 nt8.9□□□□□ -0.98
UBI4P0CG63 NDI1YML120C 1542 nt8.9□□□□□ -0.99
UBI4P0CG63 RDN18-1RDN18-1 1800 nt8.89□□□□□ -0.99
UBI4P0CG63 RDN18-2RDN18-2 1800 nt8.89□□□□□ -0.99
UBI4P0CG63 SPC25YER018C 666 nt8.89□□□□□ -0.99
UBI4P0CG63 YPR011CYPR011C 981 nt8.89□□□□□ -0.99
UBI4P0CG63 HSL7YBR133C 2484 nt8.88□□□□□ -0.99
UBI4P0CG63 YGR201CYGR201C 678 nt8.88□□□□□ -0.99
UBI4P0CG63 XDJ1YLR090W 1380 nt8.87□□□□□ -0.99
UBI4P0CG63 GPI16YHR188C 1833 nt8.87□□□□□ -0.99
UBI4P0CG63 STR3YGL184C 1398 nt8.86□□□□□ -0.99
UBI4P0CG63 YIR016WYIR016W 798 nt8.83□□□□□ -1
UBI4P0CG63 RTN2YDL204W 1182 nt8.82□□□□□ -1
UBI4P0CG63 VPS60YDR486C 690 nt8.8□□□□□ -1
UBI4P0CG63 AQY2YLL052C 450 nt8.78□□□□□ -1
UBI4P0CG63 SPT20YOL148C 1815 nt8.77□□□□□ -1.01
UBI4P0CG63 TIM23YNR017W 669 nt8.76□□□□□ -1.01
UBI4P0CG63 DUT1YBR252W 444 nt8.76□□□□□ -1.01
UBI4P0CG63 CCT4YDL143W 1587 nt8.76□□□□□ -1.01
UBI4P0CG63 YLR179CYLR179C 606 nt8.75□□□□□ -1.01
UBI4P0CG63 GDH3YAL062W 1374 nt8.74□□□□□ -1.01
UBI4P0CG63 ALG3YBL082C 1377 nt8.73□□□□□ -1.01
UBI4P0CG63 tM(CAU)CtM(CAU)C 72 nt8.73□□□□□ -1.01
UBI4P0CG63 IMT4tM(CAU)E 72 nt8.73□□□□□ -1.01
UBI4P0CG63 IMT3tM(CAU)J3 72 nt8.73□□□□□ -1.01
UBI4P0CG63 IMT1tM(CAU)O1 72 nt8.73□□□□□ -1.01
UBI4P0CG63 IMT2tM(CAU)P 72 nt8.73□□□□□ -1.01
UBI4P0CG63 SWC5YBR231C 912 nt8.73□□□□□ -1.01
UBI4P0CG63 GOR1YNL274C 1053 nt8.72□□□□□ -1.01
UBI4P0CG63 YLR235CYLR235C 399 nt8.71□□□□□ -1.02
UBI4P0CG63 AVT6YER119C 1347 nt8.71□□□□□ -1.02
UBI4P0CG63 INA1YLR413W 2028 nt8.7□□□□□ -1.02
UBI4P0CG63 PTH1YHR189W 573 nt8.7□□□□□ -1.02
UBI4P0CG63 RDN25-1RDN25-1 3396 nt8.69□□□□□ -1.02
UBI4P0CG63 RDN25-2RDN25-2 3396 nt8.69□□□□□ -1.02
UBI4P0CG63 RPC82YPR190C 1965 nt8.68□□□□□ -1.02
UBI4P0CG63 AHT1YHR093W 549 nt8.67□□□□□ -1.02
UBI4P0CG63 HEL2YDR266C 1920 nt8.62□□□□□ -1.03
UBI4P0CG63 HIF1YLL022C 1158 nt8.62□□□□□ -1.03
UBI4P0CG63 ALD4YOR374W 1560 nt8.61□□□□□ -1.03
UBI4P0CG63 YPR064WYPR064W 420 nt8.58□□□□□ -1.04
UBI4P0CG63 PLB1YMR008C 1995 nt8.58□□□□□ -1.04
UBI4P0CG63 PRM5YIL117C 957 nt8.57□□□□□ -1.04
UBI4P0CG63 RIM8YGL045W 1629 nt8.56□□□□□ -1.04
UBI4P0CG63 ARP6YLR085C 1317 nt8.53□□□□□ -1.04
UBI4P0CG63 YGL114WYGL114W 2178 nt8.51□□□□□ -1.05
UBI4P0CG63 YKL030WYKL030W 606 nt8.51□□□□□ -1.05
UBI4P0CG63 DAT1YML113W 747 nt8.51□□□□□ -1.05
UBI4P0CG63 SHM2YLR058C 1410 nt8.5□□□□□ -1.05
UBI4P0CG63 TAD3YLR316C 969 nt8.49□□□□□ -1.05
UBI4P0CG63 MUP1YGR055W 1725 nt8.49□□□□□ -1.05
UBI4P0CG63 MOT3YMR070W 1473 nt8.48□□□□□ -1.05
UBI4P0CG63 ZRT3YKL175W 1512 nt8.48□□□□□ -1.05
UBI4P0CG63 NBP35YGL091C 987 nt8.47□□□□□ -1.05
UBI4P0CG63 TIM17YJL143W 477 nt8.45□□□□□ -1.06
UBI4P0CG63 SPP1YPL138C 1062 nt8.45□□□□□ -1.06
UBI4P0CG63 YCR102CYCR102C 1107 nt8.43□□□□□ -1.06
UBI4P0CG63 SAM35YHR083W 990 nt8.43□□□□□ -1.06
UBI4P0CG63 YLR415CYLR415C 339 nt8.42□□□□□ -1.06
UBI4P0CG63 UTR1YJR049C 1593 nt8.42□□□□□ -1.06
UBI4P0CG63 HOL1YNR055C 1761 nt8.41□□□□□ -1.06
UBI4P0CG63 BDH1YAL060W 1149 nt8.41□□□□□ -1.06
UBI4P0CG63 NIT1YIL164C 600 nt8.39□□□□□ -1.07
UBI4P0CG63 MAE1YKL029C 2010 nt8.37□□□□□ -1.07
UBI4P0CG63 YJL067WYJL067W 351 nt8.37□□□□□ -1.07
UBI4P0CG63 SGT2YOR007C 1041 nt8.34□□□□□ -1.07
UBI4P0CG63 GAP1YKR039W 1809 nt8.33□□□□□ -1.08
UBI4P0CG63 ILV3YJR016C 1758 nt8.33□□□□□ -1.08
UBI4P0CG63 YNL024CYNL024C 741 nt8.32□□□□□ -1.08
UBI4P0CG63 LSC2YGR244C 1284 nt8.31□□□□□ -1.08
UBI4P0CG63 TIR3YIL011W 810 nt8.28□□□□□ -1.08
UBI4P0CG63 MET2YNL277W 1461 nt8.26□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms