Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	CRR1	YLR213C	1269 nt		10.61	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	YAT1	YAR035W	2064 nt		10.61	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	RDN25-1	RDN25-1	3396 nt		10.6	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	RDN25-2	RDN25-2	3396 nt		10.6	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	DIC1	YLR348C	897 nt		10.6	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	GID7	YCL039W	2238 nt		10.6	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	UBX6	YJL048C	1191 nt		10.59	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	PAU21	YOR394W	495 nt		10.59	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	PAU22	YPL282C	495 nt		10.59	□□□□□ -0.71
TY4B-P	A0A0B7P3V8	SPP1	YPL138C	1062 nt		10.57	□□□□□ -0.72
TY4B-P	A0A0B7P3V8	SFP1	YLR403W	2052 nt		10.57	□□□□□ -0.72
TY4B-P	A0A0B7P3V8	FTR1	YER145C	1215 nt		10.55	□□□□□ -0.72
TY4B-P	A0A0B7P3V8	MRPL8	YJL063C	717 nt		10.54	□□□□□ -0.72
TY4B-P	A0A0B7P3V8	ATF2	YGR177C	1608 nt		10.54	□□□□□ -0.72
TY4B-P	A0A0B7P3V8	YFL067W	YFL067W	528 nt		10.53	□□□□□ -0.72
TY4B-P	A0A0B7P3V8	PTH1	YHR189W	573 nt		10.53	□□□□□ -0.72
TY4B-P	A0A0B7P3V8	NPP1	YCR026C	2229 nt		10.52	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	HEM12	YDR047W	1089 nt		10.52	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	YLR235C	YLR235C	399 nt		10.52	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	GAL1	YBR020W	1587 nt		10.52	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	TRM5	YHR070W	1500 nt		10.5	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	SWE1	YJL187C	2460 nt		10.5	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	ARO7	YPR060C	771 nt		10.49	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	YHR056W-A	YHR056W-A	435 nt		10.48	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	DDR2	YOL052C-A	186 nt		10.48	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	MIC10	YCL057C-A	294 nt		10.48	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	SNG1	YGR197C	1644 nt		10.47	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	ADO1	YJR105W	1023 nt		10.46	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	AQY1	YPR192W	918 nt		10.46	□□□□□ -0.73
TY4B-P	A0A0B7P3V8	GLK1	YCL040W	1503 nt		10.46	□□□□□ -0.74
TY4B-P	A0A0B7P3V8	TIM23	YNR017W	669 nt		10.45	□□□□□ -0.74
TY4B-P	A0A0B7P3V8	YDL086C-A	YDL086C-A	435 nt		10.43	□□□□□ -0.74
TY4B-P	A0A0B7P3V8	YLR179C	YLR179C	606 nt		10.42	□□□□□ -0.74
TY4B-P	A0A0B7P3V8	RAX1	YOR301W	1308 nt		10.41	□□□□□ -0.74
TY4B-P	A0A0B7P3V8	YKL030W	YKL030W	606 nt		10.39	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	ANP1	YEL036C	1503 nt		10.38	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	CYT2	YKL087C	675 nt		10.37	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	STB1	YNL309W	1263 nt		10.37	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	YEL076C-A	YEL076C-A	651 nt		10.36	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	YEL076C	YEL076C	651 nt		10.36	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	YLR464W	YLR464W	651 nt		10.36	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	YDR524C-B	YDR524C-B	201 nt		10.35	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	SPC25	YER018C	666 nt		10.35	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	ESBP6	YNL125C	2022 nt		10.34	□□□□□ -0.75
TY4B-P	A0A0B7P3V8	GPI16	YHR188C	1833 nt		10.33	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	BNA2	YJR078W	1362 nt		10.32	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	RTG1	YOL067C	534 nt		10.32	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	AHT1	YHR093W	549 nt		10.31	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	PBP1	YGR178C	2169 nt		10.31	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	CCA1	YER168C	1641 nt		10.3	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	FEN2	YCR028C	1539 nt		10.3	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	WSC2	YNL283C	1512 nt		10.3	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	HUA1	YGR268C	597 nt		10.29	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	AAC1	YMR056C	930 nt		10.29	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	YPR064W	YPR064W	420 nt		10.29	□□□□□ -0.76
TY4B-P	A0A0B7P3V8	CCT4	YDL143W	1587 nt		10.26	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	VPS60	YDR486C	690 nt		10.25	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	MIC12	YBR262C	321 nt		10.25	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	TPO4	YOR273C	1980 nt		10.23	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	MAE1	YKL029C	2010 nt		10.23	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	HMG2	YLR450W	3138 nt		10.22	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	YIR016W	YIR016W	798 nt		10.22	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	SWC5	YBR231C	912 nt		10.22	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	TAD3	YLR316C	969 nt		10.21	□□□□□ -0.77
TY4B-P	A0A0B7P3V8	FUR4	YBR021W	1902 nt		10.19	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	ALG3	YBL082C	1377 nt		10.18	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	PAM17	YKR065C	594 nt		10.18	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	REG2	YBR050C	1017 nt		10.17	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	HHO1	YPL127C	777 nt		10.17	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	ILV2	YMR108W	2064 nt		10.17	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	DTR1	YBR180W	1719 nt		10.16	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	BIO5	YNR056C	1686 nt		10.16	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	HEM14	YER014W	1620 nt		10.16	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	UGA4	YDL210W	1716 nt		10.16	□□□□□ -0.78
TY4B-P	A0A0B7P3V8	NDI1	YML120C	1542 nt		10.14	□□□□□ -0.79
TY4B-P	A0A0B7P3V8	AGP1	YCL025C	1902 nt		10.12	□□□□□ -0.79
TY4B-P	A0A0B7P3V8	RIM8	YGL045W	1629 nt		10.11	□□□□□ -0.79
TY4B-P	A0A0B7P3V8	tL(GAG)G	tL(GAG)G	82 nt		10.11	□□□□□ -0.79
TY4B-P	A0A0B7P3V8	YGR201C	YGR201C	678 nt		10.11	□□□□□ -0.79
TY4B-P	A0A0B7P3V8	DUS1	YML080W	1272 nt		10.09	□□□□□ -0.79
TY4B-P	A0A0B7P3V8	URA8	YJR103W	1737 nt		10.09	□□□□□ -0.79
TY4B-P	A0A0B7P3V8	PRP4	YPR178W	1398 nt		10.08	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	MCM5	YLR274W	2328 nt		10.07	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	BDH1	YAL060W	1149 nt		10.07	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	YLR415C	YLR415C	339 nt		10.06	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	MAS1	YLR163C	1389 nt		10.04	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	YCL074W	YCL074W	927 nt		10.04	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	YDR510C-A	YDR510C-A	117 nt		10.04	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	XDJ1	YLR090W	1380 nt		10.03	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	GTB1	YDR221W	2109 nt		10.03	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	DPS1	YLL018C	1674 nt		10.02	□□□□□ -0.8
TY4B-P	A0A0B7P3V8	MET8	YBR213W	825 nt		10.01	□□□□□ -0.81
TY4B-P	A0A0B7P3V8	YGL114W	YGL114W	2178 nt		9.99	□□□□□ -0.81
TY4B-P	A0A0B7P3V8	RFC1	YOR217W	2586 nt		9.99	□□□□□ -0.81
TY4B-P	A0A0B7P3V8	YDR094W	YDR094W	336 nt		9.99	□□□□□ -0.81
TY4B-P	A0A0B7P3V8	GDH3	YAL062W	1374 nt		9.99	□□□□□ -0.81
TY4B-P	A0A0B7P3V8	AVT6	YER119C	1347 nt		9.98	□□□□□ -0.81
TY4B-P	A0A0B7P3V8	RSC4	YKR008W	1878 nt		9.98	□□□□□ -0.81
TY4B-P	A0A0B7P3V8	GAL2	YLR081W	1725 nt		9.97	□□□□□ -0.81
TY4B-P	A0A0B7P3V8	GOR1	YNL274C	1053 nt		9.97	□□□□□ -0.81

Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms