Protein–RNA interactions for Protein: A0A0A6YVS4

Ighv5-9-1, Immunoglobulin heavy variable 5-9-1 (Fragment), mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv5-9-1A0A0A6YVS4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv5-9-1A0A0A6YVS4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Ighv5-9-1A0A0A6YVS4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv5-9-1A0A0A6YVS4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv5-9-1A0A0A6YVS4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv5-9-1A0A0A6YVS4 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.59■□□□□ 0.73
Ighv5-9-1A0A0A6YVS4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv5-9-1A0A0A6YVS4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv5-9-1A0A0A6YVS4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv5-9-1A0A0A6YVS4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ighv5-9-1A0A0A6YVS4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv5-9-1A0A0A6YVS4 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.49■□□□□ 0.71
Ighv5-9-1A0A0A6YVS4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv5-9-1A0A0A6YVS4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv5-9-1A0A0A6YVS4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv5-9-1A0A0A6YVS4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv5-9-1A0A0A6YVS4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv5-9-1A0A0A6YVS4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv5-9-1A0A0A6YVS4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Ighv5-9-1A0A0A6YVS4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv5-9-1A0A0A6YVS4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ighv5-9-1A0A0A6YVS4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.36■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv5-9-1A0A0A6YVS4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.33■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.3■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Gm24804-201ENSMUST00000174982 85 ntBASIC19.28■□□□□ 0.68
Ighv5-9-1A0A0A6YVS4 Peli2-204ENSMUST00000226513 1320 ntBASIC19.26■□□□□ 0.67
Ighv5-9-1A0A0A6YVS4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ighv5-9-1A0A0A6YVS4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv5-9-1A0A0A6YVS4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv5-9-1A0A0A6YVS4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv5-9-1A0A0A6YVS4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv5-9-1A0A0A6YVS4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv5-9-1A0A0A6YVS4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.2■□□□□ 0.66
Ighv5-9-1A0A0A6YVS4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv5-9-1A0A0A6YVS4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv5-9-1A0A0A6YVS4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv5-9-1A0A0A6YVS4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv5-9-1A0A0A6YVS4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv5-9-1A0A0A6YVS4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv5-9-1A0A0A6YVS4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ighv5-9-1A0A0A6YVS4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.12■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Ighv5-9-1A0A0A6YVS4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.05■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.05■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Gm16148-201ENSMUST00000119653 893 ntBASIC19.04■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.03■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv5-9-1A0A0A6YVS4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv5-9-1A0A0A6YVS4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv5-9-1A0A0A6YVS4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv5-9-1A0A0A6YVS4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19■□□□□ 0.63
Ighv5-9-1A0A0A6YVS4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.99■□□□□ 0.63
Ighv5-9-1A0A0A6YVS4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms