Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AC103592.1-201ENST00000394513 664 ntBASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AC092580.1-201ENST00000433998 658 ntBASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AC119751.2-201ENST00000504529 210 ntBASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AC104982.3-201ENST00000581995 514 ntBASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 RN7SL163P-201ENST00000583100 276 ntBASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AP000346.4-201ENST00000614827 381 ntBASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AP002353.1-201ENST00000528257 1599 ntBASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 AC105206.1-202ENST00000314927 2368 ntBASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 OR8S1-201ENST00000310194 1080 ntBASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 MIR663B-201ENST00000408361 115 ntBASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 XBP1P1-201ENST00000436573 652 ntBASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 POM121L10P-201ENST00000436994 1285 ntBASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 AC005014.1-201ENST00000432006 2976 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms