Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC006435.4-201ENST00000625037 234 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AL356737.1-201ENST00000634391 234 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AC102953.2-201ENST00000609755 3026 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 RN7SL455P-201ENST00000580629 282 ntBASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 AL136295.7-201ENST00000619226 1200 ntBASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPF3BQ9BZI7 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UPF3BQ9BZI7 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
UPF3BQ9BZI7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 AP002761.4-201ENST00000565433 3361 ntBASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 OS9-203ENST00000389142 2457 ntTSL 5 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 AC104306.2-201ENST00000451877 341 ntBASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 CHCHD2P2-201ENST00000503744 321 ntBASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 MARK2P5-201ENST00000507649 634 ntBASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 AC126915.1-201ENST00000522847 1038 ntBASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 AC244452.3-201ENST00000636814 210 ntBASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPF3BQ9BZI7 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 PCDHA5-203ENST00000614258 4248 ntBASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 AL359183.1-201ENST00000623796 2132 ntBASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms