Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2E2Q96LR5 ODCP-201ENST00000459650 1639 ntBASIC10.84□□□□□ -0.67
UBE2E2Q96LR5 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2E2Q96LR5 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2E2Q96LR5 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
UBE2E2Q96LR5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 AC019109.1-201ENST00000401725 1874 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 MIR1307-201ENST00000408840 149 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 RN7SKP109-201ENST00000410592 316 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 CELP-201ENST00000411440 1249 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 HIST2H2BA-201ENST00000412169 381 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 AC092573.1-201ENST00000433054 884 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 RPL18AP3-201ENST00000462885 528 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 RN7SL564P-201ENST00000496309 250 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 RPS23-204ENST00000507980 836 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 AP000911.2-201ENST00000534330 502 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 KRT8P2-201ENST00000556193 944 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 AC135983.4-201ENST00000564116 1262 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 MIR4722-201ENST00000578292 60 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 YRDCP1-201ENST00000621419 643 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 AC026748.1-201ENST00000624349 3251 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 TUBB4AP1-201ENST00000450755 1325 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 PDXDC2P-206ENST00000534700 1315 ntBASIC10.83□□□□□ -0.68
UBE2E2Q96LR5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AC008620.2-201ENST00000510294 1569 ntBASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 NME4-203ENST00000397722 1232 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms