Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC104581.4-201ENST00000623126 3052 ntBASIC16.34■□□□□ 0.21
TRIM47Q96LD4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 RN7SL767P-201ENST00000493013 295 ntBASIC16.34■□□□□ 0.21
TRIM47Q96LD4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 AC140658.4-201ENST00000561990 352 ntBASIC16.34■□□□□ 0.21
TRIM47Q96LD4 NAV1-210ENST00000593583 726 ntBASIC16.34■□□□□ 0.21
TRIM47Q96LD4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 AC067931.2-201ENST00000623655 2003 ntBASIC16.34■□□□□ 0.21
TRIM47Q96LD4 AC011498.7-201ENST00000624986 2027 ntBASIC16.34■□□□□ 0.21
TRIM47Q96LD4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM47Q96LD4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRIM47Q96LD4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 NHP2P1-201ENST00000335274 462 ntBASIC16.33■□□□□ 0.2
TRIM47Q96LD4 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AL929302.1-201ENST00000426556 871 ntBASIC16.33■□□□□ 0.2
TRIM47Q96LD4 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AC068831.5-201ENST00000557387 328 ntBASIC16.33■□□□□ 0.2
TRIM47Q96LD4 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 MIR6816-201ENST00000620368 66 ntBASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AC020910.6-201ENST00000623084 1459 ntBASIC16.33■□□□□ 0.2
TRIM47Q96LD4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 AL359881.3-201ENST00000602640 1721 ntBASIC16.33■□□□□ 0.2
TRIM47Q96LD4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM47Q96LD4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms