Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 BX324167.2-201ENST00000623717 3316 ntBASIC12.46□□□□□ -0.42
RFT1Q96AA3 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
RFT1Q96AA3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
RFT1Q96AA3 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.46□□□□□ -0.42
RFT1Q96AA3 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 KRT8P4-201ENST00000509735 1454 ntBASIC12.46□□□□□ -0.42
RFT1Q96AA3 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.46□□□□□ -0.42
RFT1Q96AA3 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.46□□□□□ -0.42
RFT1Q96AA3 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RFT1Q96AA3 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
RFT1Q96AA3 AC009093.10-201ENST00000641956 1442 ntBASIC12.45□□□□□ -0.42
RFT1Q96AA3 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 AC092933.1-201ENST00000393644 945 ntBASIC12.45□□□□□ -0.42
RFT1Q96AA3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 USP32P1-208ENST00000506594 1164 ntBASIC12.45□□□□□ -0.42
RFT1Q96AA3 COX5BP1-201ENST00000507622 393 ntBASIC12.45□□□□□ -0.42
RFT1Q96AA3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.45□□□□□ -0.42
RFT1Q96AA3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 AC008735.3-201ENST00000596646 500 ntBASIC12.45□□□□□ -0.42
RFT1Q96AA3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 PDIA3P1-201ENST00000471856 1510 ntBASIC12.45□□□□□ -0.42
RFT1Q96AA3 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFT1Q96AA3 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.45□□□□□ -0.42
RFT1Q96AA3 AC012531.1-201ENST00000562848 2680 ntBASIC12.45□□□□□ -0.42
RFT1Q96AA3 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC104758.3-203ENST00000562938 2123 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms