Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 AP000356.3-201ENST00000382243 753 ntBASIC15.69■□□□□ 0.1
TNFRSF25Q93038 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 FGFR3P1-201ENST00000449999 601 ntBASIC15.69■□□□□ 0.1
TNFRSF25Q93038 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 AC068867.1-201ENST00000559855 150 ntBASIC15.69■□□□□ 0.1
TNFRSF25Q93038 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 BEND3P3-201ENST00000611030 2440 ntBASIC15.69■□□□□ 0.1
TNFRSF25Q93038 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 PCDHA6-201ENST00000378126 3267 ntBASIC15.69■□□□□ 0.1
TNFRSF25Q93038 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TNFRSF25Q93038 AC074138.1-201ENST00000611182 1303 ntBASIC15.68■□□□□ 0.1
TNFRSF25Q93038 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 AC115284.2-201ENST00000624646 2054 ntBASIC15.68■□□□□ 0.1
TNFRSF25Q93038 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 CFL1P6-201ENST00000400899 494 ntBASIC15.68■□□□□ 0.1
TNFRSF25Q93038 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.68■□□□□ 0.1
TNFRSF25Q93038 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 RN7SKP155-201ENST00000516031 288 ntBASIC15.68■□□□□ 0.1
TNFRSF25Q93038 RNA5SP417-201ENST00000516459 108 ntBASIC15.68■□□□□ 0.1
TNFRSF25Q93038 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 TMCO5B-205ENST00000530020 894 ntBASIC15.68■□□□□ 0.1
TNFRSF25Q93038 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 RHOQP1-201ENST00000555758 579 ntBASIC15.68■□□□□ 0.1
TNFRSF25Q93038 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF25Q93038 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF25Q93038 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF25Q93038 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF25Q93038 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF25Q93038 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFRSF25Q93038 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFRSF25Q93038 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFRSF25Q93038 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF25Q93038 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms