Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.83□□□□□ -0.03
LMO3Q8TAP4 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 AL662890.1-201ENST00000396818 632 ntBASIC14.83□□□□□ -0.04
LMO3Q8TAP4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 IMP3P2-201ENST00000489760 475 ntBASIC14.83□□□□□ -0.04
LMO3Q8TAP4 RN7SL564P-201ENST00000496309 250 ntBASIC14.83□□□□□ -0.04
LMO3Q8TAP4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.83□□□□□ -0.04
LMO3Q8TAP4 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 AC083964.2-201ENST00000623988 2396 ntBASIC14.83□□□□□ -0.04
LMO3Q8TAP4 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.83□□□□□ -0.04
LMO3Q8TAP4 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO3Q8TAP4 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.82□□□□□ -0.04
LMO3Q8TAP4 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 AP000437.1-201ENST00000624057 2085 ntBASIC14.82□□□□□ -0.04
LMO3Q8TAP4 AL513497.1-201ENST00000624273 2083 ntBASIC14.82□□□□□ -0.04
LMO3Q8TAP4 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 IGHJ2P-201ENST00000454480 60 ntBASIC14.82□□□□□ -0.04
LMO3Q8TAP4 ORAOV1P1-201ENST00000503108 395 ntBASIC14.82□□□□□ -0.04
LMO3Q8TAP4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 MIR2392-201ENST00000584881 84 ntBASIC14.82□□□□□ -0.04
LMO3Q8TAP4 AP005264.5-201ENST00000590066 467 ntBASIC14.82□□□□□ -0.04
LMO3Q8TAP4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.82□□□□□ -0.04
LMO3Q8TAP4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms