Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 SCARNA12-201ENST00000459155 270 ntBASIC14.86□□□□□ -0.03
RNF135Q8IUD6 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 AC092862.1-201ENST00000541534 533 ntBASIC14.86□□□□□ -0.03
RNF135Q8IUD6 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 AL160191.2-201ENST00000603975 601 ntBASIC14.86□□□□□ -0.03
RNF135Q8IUD6 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.86□□□□□ -0.03
RNF135Q8IUD6 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 CICP4-201ENST00000447359 2812 ntBASIC14.86□□□□□ -0.03
RNF135Q8IUD6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 FUCA1P1-201ENST00000374476 1351 ntBASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AP002353.1-201ENST00000528257 1599 ntBASIC14.85□□□□□ -0.03
RNF135Q8IUD6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AC011498.7-201ENST00000624986 2027 ntBASIC14.85□□□□□ -0.03
RNF135Q8IUD6 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 OR8T1P-201ENST00000421347 918 ntBASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AC013553.1-201ENST00000560906 267 ntBASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AC011462.4-201ENST00000616866 449 ntBASIC14.85□□□□□ -0.03
RNF135Q8IUD6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 HSPA7-201ENST00000445535 1927 ntBASIC14.85□□□□□ -0.03
RNF135Q8IUD6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 AL928921.2-201ENST00000641325 2442 ntBASIC14.85□□□□□ -0.03
RNF135Q8IUD6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF135Q8IUD6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms