Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AL627231.1-201ENST00000394467 1125 ntBASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 PPP1R2P4-201ENST00000424051 595 ntBASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 RN7SL665P-201ENST00000578793 300 ntBASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AL133467.4-201ENST00000602953 725 ntBASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 NUTM2HP-201ENST00000442076 2498 ntBASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 TEKT4P2-202ENST00000559466 1312 ntBASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.59□□□□□ -0.07
TTC39BQ5VTQ0 AC004241.5-201ENST00000623870 2448 ntBASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC39BQ5VTQ0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 LINC00265-2P-201ENST00000413372 782 ntBASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 AC098934.1-203ENST00000442868 1262 ntBASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 KRT18P8-201ENST00000581937 1246 ntBASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms