Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL357054.1-201ENST00000407035 1227 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 HNRNPA1P4-201ENST00000509706 756 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AKR1B1P3-201ENST00000525311 588 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC018868.2-201ENST00000559655 1259 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 TPI1P3-201ENST00000335020 740 ntBASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 MIR4526-201ENST00000583168 87 ntBASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 AP000346.2-202ENST00000425948 383 ntBASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 AL133551.1-201ENST00000610279 1222 ntBASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
VPS13DQ5THJ4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 TCAF1P1-201ENST00000414990 2232 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AL356653.1-201ENST00000402743 360 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 RN7SL460P-201ENST00000582806 258 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC007191.1-201ENST00000623179 2995 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 LINC02228-204ENST00000642115 2962 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC018445.4-201ENST00000624066 2291 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms