Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 SNORA50C-201ENST00000408535 133 ntBASIC17.14■□□□□ 0.33
RC3H1Q5TC82 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 AL954722.1-201ENST00000431238 259 ntBASIC17.14■□□□□ 0.33
RC3H1Q5TC82 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 RN7SL47P-201ENST00000488710 299 ntBASIC17.14■□□□□ 0.33
RC3H1Q5TC82 CETN3-205ENST00000522842 664 ntTSL 2 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 AP001102.1-201ENST00000528959 409 ntBASIC17.14■□□□□ 0.33
RC3H1Q5TC82 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 NF1P11-201ENST00000621292 1282 ntBASIC17.14■□□□□ 0.33
RC3H1Q5TC82 SNORA50.1-201ENST00000628590 135 ntBASIC17.14■□□□□ 0.33
RC3H1Q5TC82 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RC3H1Q5TC82 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 ATF4P4-201ENST00000393544 1930 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 SNORA30.1-201ENST00000363193 129 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 NOS2P3-201ENST00000411468 867 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 NOS2P2-201ENST00000426269 867 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC010997.1-201ENST00000447646 350 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AL161727.1-201ENST00000457409 530 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 FAM86JP-202ENST00000484500 988 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC092535.4-201ENST00000609548 397 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AL589935.2-201ENST00000616471 1231 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 MIR6125-201ENST00000618986 96 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC148476.1-201ENST00000622182 705 ntBASIC17.13■□□□□ 0.33
RC3H1Q5TC82 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RC3H1Q5TC82 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 RN7SL646P-201ENST00000492969 297 ntBASIC17.12■□□□□ 0.33
RC3H1Q5TC82 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 AC090820.1-201ENST00000519722 591 ntBASIC17.12■□□□□ 0.33
RC3H1Q5TC82 AC103724.2-201ENST00000520355 476 ntBASIC17.12■□□□□ 0.33
RC3H1Q5TC82 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RC3H1Q5TC82 AL512324.3-201ENST00000619383 882 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms