Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LMO4P61968 SNORA50C-201ENST00000408535 133 ntBASIC11.33□□□□□ -0.6
LMO4P61968 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 AL451000.1-201ENST00000451300 1186 ntBASIC11.33□□□□□ -0.6
LMO4P61968 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LMO4P61968 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC11.33□□□□□ -0.6
LMO4P61968 AC083801.1-201ENST00000491689 358 ntBASIC11.33□□□□□ -0.6
LMO4P61968 CISD2-202ENST00000503643 808 ntTSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 GDNF-207ENST00000515058 764 ntTSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC11.33□□□□□ -0.6
LMO4P61968 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
LMO4P61968 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 AC078814.4-201ENST00000546650 327 ntBASIC11.33□□□□□ -0.6
LMO4P61968 AC023968.2-201ENST00000560593 1049 ntBASIC11.33□□□□□ -0.6
LMO4P61968 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 FAM187B2P-201ENST00000577135 713 ntBASIC11.33□□□□□ -0.6
LMO4P61968 RNF146-211ENST00000609447 607 ntTSL 4 BASIC11.33□□□□□ -0.6
LMO4P61968 URAHP-205ENST00000610227 398 ntBASIC11.33□□□□□ -0.6
LMO4P61968 AC113385.2-201ENST00000614465 762 ntBASIC11.33□□□□□ -0.6
LMO4P61968 SNORA50.1-201ENST00000628590 135 ntBASIC11.33□□□□□ -0.6
LMO4P61968 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LMO4P61968 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LMO4P61968 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LMO4P61968 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LMO4P61968 AGAP10P-201ENST00000454844 2418 ntBASIC11.33□□□□□ -0.6
LMO4P61968 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.32□□□□□ -0.6
LMO4P61968 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LMO4P61968 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.32□□□□□ -0.6
LMO4P61968 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
LMO4P61968 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 AC067750.1-201ENST00000608826 6545 ntBASIC11.32□□□□□ -0.6
LMO4P61968 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LMO4P61968 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LMO4P61968 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.32□□□□□ -0.6
LMO4P61968 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
LMO4P61968 PTGER4P2-201ENST00000328411 252 ntBASIC11.32□□□□□ -0.6
LMO4P61968 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC11.32□□□□□ -0.6
LMO4P61968 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC11.32□□□□□ -0.6
LMO4P61968 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC11.32□□□□□ -0.6
LMO4P61968 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC11.32□□□□□ -0.6
LMO4P61968 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC11.32□□□□□ -0.6
LMO4P61968 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC11.32□□□□□ -0.6
LMO4P61968 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 PTGER4P3-201ENST00000458150 252 ntBASIC11.32□□□□□ -0.6
LMO4P61968 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC11.32□□□□□ -0.6
LMO4P61968 SRP14-204ENST00000558720 780 ntTSL 2 BASIC11.32□□□□□ -0.6
LMO4P61968 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC11.32□□□□□ -0.6
LMO4P61968 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 APOC1-209ENST00000592885 562 ntTSL 3 BASIC11.32□□□□□ -0.6
LMO4P61968 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC11.32□□□□□ -0.6
LMO4P61968 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC11.32□□□□□ -0.6
LMO4P61968 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC11.32□□□□□ -0.6
LMO4P61968 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC11.32□□□□□ -0.6
LMO4P61968 AC137723.2-201ENST00000623540 398 ntBASIC11.32□□□□□ -0.6
LMO4P61968 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LMO4P61968 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LMO4P61968 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms