Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.22■□□□□ 0.03
NCKAP1LP55160 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.22■□□□□ 0.03
NCKAP1LP55160 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
NCKAP1LP55160 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.22■□□□□ 0.03
NCKAP1LP55160 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1LP55160 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.21■□□□□ 0.03
NCKAP1LP55160 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 AC069218.1-201ENST00000435269 762 ntBASIC15.21■□□□□ 0.03
NCKAP1LP55160 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 RN7SKP155-201ENST00000516031 288 ntBASIC15.21■□□□□ 0.03
NCKAP1LP55160 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 MIR3180-2-201ENST00000581748 88 ntBASIC15.21■□□□□ 0.03
NCKAP1LP55160 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 AC140113.1-201ENST00000603467 169 ntBASIC15.21■□□□□ 0.03
NCKAP1LP55160 LINC00244-201ENST00000625073 613 ntBASIC15.21■□□□□ 0.03
NCKAP1LP55160 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NCKAP1LP55160 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1LP55160 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1LP55160 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1LP55160 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
NCKAP1LP55160 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
NCKAP1LP55160 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
NCKAP1LP55160 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1LP55160 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1LP55160 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1LP55160 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NCKAP1LP55160 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1LP55160 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 MIR33B-201ENST00000385104 96 ntBASIC15.2■□□□□ 0.02
NCKAP1LP55160 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 AC073210.1-201ENST00000414799 232 ntBASIC15.2■□□□□ 0.02
NCKAP1LP55160 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 AL354861.1-201ENST00000445213 355 ntBASIC15.2■□□□□ 0.02
NCKAP1LP55160 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 AC093300.1-201ENST00000510368 1201 ntBASIC15.2■□□□□ 0.02
NCKAP1LP55160 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 NUDT4P2-201ENST00000578341 546 ntBASIC15.2■□□□□ 0.02
NCKAP1LP55160 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms