Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 AC089987.1-201ENST00000551654 2209 ntBASIC13.04□□□□□ -0.32
EFNA3P52797 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
EFNA3P52797 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNA3P52797 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNA3P52797 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
EFNA3P52797 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.04□□□□□ -0.32
EFNA3P52797 AC005722.1-201ENST00000431878 964 ntBASIC13.04□□□□□ -0.32
EFNA3P52797 AC253536.4-201ENST00000440539 267 ntBASIC13.04□□□□□ -0.32
EFNA3P52797 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.04□□□□□ -0.32
EFNA3P52797 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 PRSS3P1-201ENST00000503996 742 ntBASIC13.04□□□□□ -0.32
EFNA3P52797 AC093826.1-201ENST00000508655 993 ntBASIC13.04□□□□□ -0.32
EFNA3P52797 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
EFNA3P52797 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.04□□□□□ -0.32
EFNA3P52797 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNA3P52797 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.04□□□□□ -0.32
EFNA3P52797 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNA3P52797 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.04□□□□□ -0.32
EFNA3P52797 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.04□□□□□ -0.32
EFNA3P52797 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
EFNA3P52797 AL009176.1-201ENST00000607876 650 ntBASIC13.04□□□□□ -0.32
EFNA3P52797 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
EFNA3P52797 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNA3P52797 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.04□□□□□ -0.32
EFNA3P52797 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNA3P52797 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
EFNA3P52797 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNA3P52797 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
EFNA3P52797 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA3P52797 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA3P52797 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
EFNA3P52797 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 AC108734.2-201ENST00000420887 1069 ntBASIC13.03□□□□□ -0.32
EFNA3P52797 AC012362.1-201ENST00000434906 739 ntBASIC13.03□□□□□ -0.32
EFNA3P52797 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNA3P52797 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNA3P52797 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA3P52797 RN7SL375P-201ENST00000492442 298 ntBASIC13.03□□□□□ -0.32
EFNA3P52797 EEF1GP8-201ENST00000506566 1154 ntBASIC13.03□□□□□ -0.32
EFNA3P52797 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.03□□□□□ -0.32
EFNA3P52797 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.03□□□□□ -0.32
EFNA3P52797 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNA3P52797 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA3P52797 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.03□□□□□ -0.32
EFNA3P52797 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 AP001065.2-201ENST00000617205 644 ntBASIC13.03□□□□□ -0.32
EFNA3P52797 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 AC002044.2-201ENST00000624910 970 ntBASIC13.03□□□□□ -0.32
EFNA3P52797 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms