Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 SNORA50C-201ENST00000408535 133 ntBASIC12.41□□□□□ -0.42
LHX2P50458 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 PIN4P1-201ENST00000451079 396 ntBASIC12.41□□□□□ -0.42
LHX2P50458 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.41□□□□□ -0.42
LHX2P50458 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.41□□□□□ -0.42
LHX2P50458 LINC00634-202ENST00000505157 222 ntBASIC12.41□□□□□ -0.42
LHX2P50458 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.41□□□□□ -0.42
LHX2P50458 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.41□□□□□ -0.42
LHX2P50458 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.41□□□□□ -0.42
LHX2P50458 AL118522.1-201ENST00000611368 560 ntBASIC12.41□□□□□ -0.42
LHX2P50458 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.41□□□□□ -0.42
LHX2P50458 AC020763.3-201ENST00000625095 2904 ntBASIC12.41□□□□□ -0.42
LHX2P50458 SNORA50.1-201ENST00000628590 135 ntBASIC12.41□□□□□ -0.42
LHX2P50458 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LHX2P50458 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
LHX2P50458 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LHX2P50458 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LHX2P50458 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LHX2P50458 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.4□□□□□ -0.42
LHX2P50458 PTENP1-202ENST00000532280 3996 ntBASIC12.4□□□□□ -0.42
LHX2P50458 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LHX2P50458 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 ABCD1P4-201ENST00000399687 604 ntBASIC12.4□□□□□ -0.42
LHX2P50458 ACTBP14-201ENST00000411655 1089 ntBASIC12.4□□□□□ -0.42
LHX2P50458 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.4□□□□□ -0.42
LHX2P50458 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 AC084752.1-201ENST00000509766 622 ntBASIC12.4□□□□□ -0.42
LHX2P50458 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.4□□□□□ -0.42
LHX2P50458 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 RN7SL556P-201ENST00000582856 298 ntBASIC12.4□□□□□ -0.42
LHX2P50458 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.4□□□□□ -0.42
LHX2P50458 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.4□□□□□ -0.42
LHX2P50458 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.4□□□□□ -0.42
LHX2P50458 MIR6727-201ENST00000620702 65 ntBASIC12.4□□□□□ -0.42
LHX2P50458 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.4□□□□□ -0.42
LHX2P50458 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LHX2P50458 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.4□□□□□ -0.42
LHX2P50458 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.4□□□□□ -0.42
LHX2P50458 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LHX2P50458 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms