Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBEC1P41238 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBEC1P41238 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBEC1P41238 FTH1P22-201ENST00000456305 520 ntBASIC12.63□□□□□ -0.39
APOBEC1P41238 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBEC1P41238 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBEC1P41238 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
APOBEC1P41238 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 NRADDP-202ENST00000641269 1585 ntBASIC12.63□□□□□ -0.39
APOBEC1P41238 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 CR383656.2-201ENST00000548656 2254 ntBASIC12.63□□□□□ -0.39
APOBEC1P41238 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
APOBEC1P41238 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.62□□□□□ -0.39
APOBEC1P41238 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.62□□□□□ -0.39
APOBEC1P41238 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
APOBEC1P41238 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
APOBEC1P41238 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
APOBEC1P41238 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.62□□□□□ -0.39
APOBEC1P41238 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.62□□□□□ -0.39
APOBEC1P41238 SLC25A24P2-201ENST00000415059 510 ntBASIC12.62□□□□□ -0.39
APOBEC1P41238 RPL8P2-201ENST00000430538 502 ntBASIC12.62□□□□□ -0.39
APOBEC1P41238 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.62□□□□□ -0.39
APOBEC1P41238 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.62□□□□□ -0.39
APOBEC1P41238 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
APOBEC1P41238 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.62□□□□□ -0.39
APOBEC1P41238 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 AF254983.2-201ENST00000612331 135 ntBASIC12.62□□□□□ -0.39
APOBEC1P41238 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
APOBEC1P41238 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms